Gene Tpen_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1723 
Symbol 
ID4601748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1665328 
End bp1666470 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content50% 
IMG OID639774496 
Productglycosyl transferase, group 1 
Protein accessionYP_921121 
Protein GI119720626 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.952593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCC TTTACGTCAA CCCAGCAAAC ATCGATTACC CAGGTGGCGG CGAAAGATTC 
GCAGTAGAAG TGCTAACGAG GCTCAGCAAA AGAGGGCACG AGGTCGGAGT CCTGCATATC
AACTGGGCGC CGCACCCGGC TACCAGCGCG GGCAACGAGT CGAAGCTCCT AGACCGCGGC
GCTGAGCTAC ACAAGTGCGG CTACATAAAA CTGCCGAGAG GCTTCCCAGT AGTGGATCCC
CGTTGCCTAG TCAAGCCCTC GAAGCAGTAC GACGTCCTCT ACATCCCCGC GTACTCCCCC
AACGAGCTAA CAGTATCCCT CCTGAAAAAG TCCAAGGCGC TAAGCGTGCC AGCAGTTGCC
GTCTTCCACT GCATGCTCGC AGACAACGTC CTAGCGCGTC TCTACACCCC GCTCTACATA
GCGGCGTTCA ACAGCTTCGA CAAGCTACAT GTGCTCAACA GGTTCCAGCG CAACTTCCTA
AAGAGCCACG GGATACCGGA GGAAAAGATC GAGTTCATAC CCAATGGAGT GGATACGAGC
ACATTCCAAC TGTGCAGGGA CCCCTCTGCC TCCGAGGACT TTAATATCGT CTTTGTAGGA
AGACTCTTAA AAGATAAAGG TGTAGACACC CTACTGCGAA TTATTTACCT CATTAACGAT
GAGCTAAATT TACACGACGT GAAGTTTACA ATAGTAGGTT CAGGCCCCCT CGAGGAAGAC
ATTAAGAAGC TTGCTCAAAA ATACCAAAAT GTAGTATTCC TAGGATACGT GAAGCATGAA
AACATGCCGA GCATTTATAG GGAAGCAAAC TTGTTCCTAC TACCCTCCAG ATCTGAGGGT
ATGCCCCTAA GCCTTCTCGA GGCTCAAGCC TGCGGGCTAC CTGCCGTCGC CTCAAAGATC
CCTGGAGTAC TCGACATAGT AAGGGATGGA GTAACCGGGA GGCTGGTCGA CGCAGAGGAC
GTCCGTGGCT TTGTGTCAGC GATAGAAGAG TGTTACCGGC TTTGGGAAAG CTCGCCTCAA
GAGTACTATA ACTTGAACAA AAAAATTAGA GAATATATAG TTAGGAACTA CGACTTAGAG
GTAGTCGTGG GAAAAATAGA GAAAATGCTT CACGAAGCAA TCTATAAGGT GCAAGTTTCG
TGA
 
Protein sequence
MKILYVNPAN IDYPGGGERF AVEVLTRLSK RGHEVGVLHI NWAPHPATSA GNESKLLDRG 
AELHKCGYIK LPRGFPVVDP RCLVKPSKQY DVLYIPAYSP NELTVSLLKK SKALSVPAVA
VFHCMLADNV LARLYTPLYI AAFNSFDKLH VLNRFQRNFL KSHGIPEEKI EFIPNGVDTS
TFQLCRDPSA SEDFNIVFVG RLLKDKGVDT LLRIIYLIND ELNLHDVKFT IVGSGPLEED
IKKLAQKYQN VVFLGYVKHE NMPSIYREAN LFLLPSRSEG MPLSLLEAQA CGLPAVASKI
PGVLDIVRDG VTGRLVDAED VRGFVSAIEE CYRLWESSPQ EYYNLNKKIR EYIVRNYDLE
VVVGKIEKML HEAIYKVQVS