| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1683 |
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| Symbol | |
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| ID | 4600571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1631173 |
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| End bp | 1632420 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639774456 |
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| Product | major facilitator transporter |
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| Protein accession | YP_921081 |
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| Protein GI | 119720586 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.249309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCGC GCCTACTCCC CGTCTTGATG GCTGGCTGGG CTATCGGCGC GATGTACGCG
GGAGTGGTCA GCGGGACCTT GACGCTGATA AGGGCGGAGC TCGCGATGGG AGCGGAGGAG
GCCGGGAGGG TTCTGAGCAG CTGGCTCCTC GGGATGCTCC TCGGCGCCTC CCTGATCGGC
TACCTCTCCG ACAGGGTTGG GCGTAGGGCG TCCCTCGTCG CCTCCTACGC ACTCATGGGT
GTTTTCACCC CTATGAGCGC CGCGGCCCGG GGATGGCTGG ACCTATCGGT GTACAGGGTG
CTCGCGGGGG CCGGGAACGC GGGCTACATG GTCACGGCGA GCGTGCTCCT AGCGGAGTAC
GCGCCGACCT CTTCCAGGGG CAGGCAGGTC GCAGTGCTGG AGAGCGCGTG GGCGCTCGGG
TGGCTGGCAT CCCTCGTGCT ATCGCGGCTA ATCGCGCCCA GCTACGGCTG GCGCGCCGTC
TTCTTAGCGT CCAGCGCGGC GCTGGCACTG CTCCCTGTTC TCTACGTAGC CGTCCCGGAG
TCCCTCAGGT TCCTCGTGTC TAAGGGTAGG CTCGCCGAAG CCGAGGCCCT CGCGGGGAGG
CTCGGGGTAG AGGTGCCGCG GGCCCAGCCG GCCGCTAGGG CCGGGCTGAG GGACCTCGTC
GGGAGGAGGT ACCTGAGGAG GAGCGTGATG CTGTGGATCC ACTGGTTCAT GCTCGTACTC
GCGTACTGGG GGATCTTCCT CTGGCTCCCC GACATACTCT ACAAGCGCGG CATACCCTTC
GTCAGGAGCC TCGACTACGC GATACTGATA ACGCTAGCCC AGATACCGGG CTACCTGTCG
GGAGCCTACC TCGTAGAGGT CGCCGGCAGG AAGCCCGTCC TCGCCGCCTA CATGCTGGGC
GCGGGCATCG CGAGCGCCGG GCTGTGGGCC GCGAAGACAG ACCTCGAGGC CCTCGCGTGG
GGCGTGCTAG TCTCGTTCTT CAACCTCGGC GCCTGGGGCG TGACCTACGC CTACACTCCG
GAGCTGTACC CAACCGAGCT CAGGGGAACC GGTAGCGGGT GGGCAAACGC ATTCGGGAGG
ATAGGCGGGA TCCTCGGACC CTACGTGGCC GGCGTCATGA TACAGTCGTA CGGGAACCCC
TCGGCCCCCT TCGCCGTCTT CGCGCTGGCG CACGTGGTCT CCGCCGCCGT GGTCGCCGCG
CTGGGCGTCG AGACGAAGGG GAGAAGCCTC GAAGAGGTCT CGGCTTAA
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| Protein sequence | MKSRLLPVLM AGWAIGAMYA GVVSGTLTLI RAELAMGAEE AGRVLSSWLL GMLLGASLIG
YLSDRVGRRA SLVASYALMG VFTPMSAAAR GWLDLSVYRV LAGAGNAGYM VTASVLLAEY
APTSSRGRQV AVLESAWALG WLASLVLSRL IAPSYGWRAV FLASSAALAL LPVLYVAVPE
SLRFLVSKGR LAEAEALAGR LGVEVPRAQP AARAGLRDLV GRRYLRRSVM LWIHWFMLVL
AYWGIFLWLP DILYKRGIPF VRSLDYAILI TLAQIPGYLS GAYLVEVAGR KPVLAAYMLG
AGIASAGLWA AKTDLEALAW GVLVSFFNLG AWGVTYAYTP ELYPTELRGT GSGWANAFGR
IGGILGPYVA GVMIQSYGNP SAPFAVFALA HVVSAAVVAA LGVETKGRSL EEVSA
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