Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1648 |
Symbol | |
ID | 4601661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 1596378 |
End bp | 1597196 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639774421 |
Product | fructose-bisphosphate aldolase |
Protein accession | YP_921046 |
Protein GI | 119720551 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1830] DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00227658 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTATG GGTACATAGG TAAGAGAGTT AGGCTCGGCA GGATACTTAG AGACGGCAAG GCCGTAGTGT TCGCGTTCGA CCACGGAGTC GAGCACGGTC CAGGCGACTT CCCAGGGGAG ACTGTGAACC CGAGGAAGAT CCTCTCCAAG GTTGTCGGGG AGGTGGACGC CGTCATGATG CTACCGGGCA TAGCGGCTCT GACCAGCGAG GTTTGGCAGG GAAAGGTGCC GCTGATAGTC AAGGTGACTA GCAAGACTAG CCTGAGGCCC GAGGCAGAGA AGCTGCTTCA AAGCCCGTTC GGCTTCGTGG AGGACGCCGT CGCGCTGGGC GCCGACGCTG TCGCGGCAAC CGTGTACTGG GGGAGCAACT TCGAGGACTT GATGCTGGAG CGCTGGTTCC AGGTGAAGAG GGCCGCGGAG ACCTACGGGT TGCCTTGCCT GCAACTCTCG TACCCGAGGG GCCCCGCGAT AAAGAACATG TACGACGTGG AGGTTGTGAG GTACGGTGTC CGCGCAGCCA TCGAGAGCGG GGCAGACCTG ATCAAGACTT ACTACACGGG GAGCACCGAG AGCTTCAGGA GGGTGGTCGA GGTAGCCGCC GGCGTACCGG TGCTTATGAG CGGCGGCGCG AAGGCGAGGA CTCTGCTGGA CTTCCTCTAC GTCGTGAAGA GCGTGATGGA CGCCGGCGCG CAGGGCGTCG TCGTCGGTAG GAACATCTTC CAGCACGAGG ACCCCACCCT CGCGGCTAAG GCGATAATGT ACGTTGTGCA CGAAGGCTAC GCTCCCGAAG AGGCTTTGAG GAAAGCCGGG GGGCAGTGA
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Protein sequence | MGYGYIGKRV RLGRILRDGK AVVFAFDHGV EHGPGDFPGE TVNPRKILSK VVGEVDAVMM LPGIAALTSE VWQGKVPLIV KVTSKTSLRP EAEKLLQSPF GFVEDAVALG ADAVAATVYW GSNFEDLMLE RWFQVKRAAE TYGLPCLQLS YPRGPAIKNM YDVEVVRYGV RAAIESGADL IKTYYTGSTE SFRRVVEVAA GVPVLMSGGA KARTLLDFLY VVKSVMDAGA QGVVVGRNIF QHEDPTLAAK AIMYVVHEGY APEEALRKAG GQ
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