Gene Tpen_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1606 
Symbol 
ID4601537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand+ 
Start bp1554212 
End bp1554769 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content58% 
IMG OID639774379 
Productrubrerythrin 
Protein accessionYP_921004 
Protein GI119720509 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0475668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCC ACGAAATAAC AAGAGACTTG CTTCTAAGCG CCTTCGGCGG AGAGTCAATG 
GCGCACATGA GGTACCTGGT GTTCGCCGAG ATAGCCGATA GAGAAGGTTT CCCAAACGTC 
GCTAGACTCT TCAGAGCAAT AGCCTACGCC GAGTTCGTGC ACGCGAAAAA CCACTACGGG 
AACCTCGGCG ACTACAAGGA GGCTTTCCCC GTGTACGCCG GCACCCCAGC GGGGCCTGGA 
ACTACCTCCA AGAACCTCGA ACTAGCCATA ATGGGCGAGG AATACGAGGT TAACGAGATG 
TACCCAGCCT ACATCGAGGT CGCCAGGTTC CAGGGCGAGA AGGGGGCCGA GAGGAGCTTC 
CGCTGGGCCC TCGAAGCGGA GAAGATCCAC GCGAAGCTAT ACAGGGAGGC TAAAGCCAGC 
GTAGACCAAG GAAAGGACTG GCCGATAGAC GGGAAAGTCT GGGTATGCCC CGTATGCGGG 
CACACGTACG TTGGACCAGA GCCGCCCGAG AAGTGCCCGA TCTGCGGAGC CCCGAGAGAG 
AAATACCAGG GGTTCTGA
 
Protein sequence
MKLHEITRDL LLSAFGGESM AHMRYLVFAE IADREGFPNV ARLFRAIAYA EFVHAKNHYG 
NLGDYKEAFP VYAGTPAGPG TTSKNLELAI MGEEYEVNEM YPAYIEVARF QGEKGAERSF 
RWALEAEKIH AKLYREAKAS VDQGKDWPID GKVWVCPVCG HTYVGPEPPE KCPICGAPRE 
KYQGF