| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1588 |
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| Symbol | |
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| ID | 4600552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1538899 |
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| End bp | 1540257 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639774361 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_920986 |
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| Protein GI | 119720491 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGC AACAAAACAG GTTGGTTTTA GCCTCTATCG CCGTAGGGAT AATAGCTCTC
CTAGTGAGCC TCTACGCCGT TGTAACCGTT CAGTCGCTGG CATCCGCGAT TAGCGATCTC
AAAGCCTCGA TAAGCAACCT CCAGGGCACG GTTTCGAGCC TCCAGCAACA AGTCGGGAAG
ATATCCCAGC AACCCGCGCC CACTACACCC CCCGTACAGA AAGTAAAGCT GGTGGTGATC
GGCCCGTGGG CGGGTGACGA GGCGAAGTAC TTCCAGGCCG TGATCGACGC CTACGTAAAG
ACGCACCCCA ACGTCGAGAT TGAGTACAGG ACTATGCGCG CCGAGGACGT AGCGGCGACA
ATGCCCATAC AGTTCGCCGC CGGCGTAGCT CCTGGAGACG TAATCTTCGG GTGGGCGTGG
TTCATCGCCA AGATGGGCAA GGAGGGGCAT CTAGTAGACC TCACAGGCAT AATCAAGGAA
AACGAGTACG TACCGGGAAT CGTCGACGCC GTGAAAGCCG ACGGCAAGAT CTGGGGTGCA
CCGTTCACGA TGTGGCTAAA GCCTGGCTTC TGGTACAGGA AGTCCTTCTT CCAGAAGTAC
GGGCTAACAG AGCCGAAGTC CTACGCCGAG TTCGTGCAAC TACTGGAGAA GATCAAGGGG
ATACCCGGCG TGAAGAACCC CATAGCCACG GGAGACGGGG TCGGGTGGCC GATAAGCGAC
ATTGTCGAAC ACTTCATAAT CGCGTACGGC GGTCCACAGA TGCAACTAAA CCTCATATCC
GGGAAGACTA GGTTCACGGA TCCCAGCGTG AGGAAGGTGT TCTCCGACTA CCTCATACCG
CTACTCCAGA AAGGCTACTT CAGCGAGCCG ATAGAGTGGA CCACTGTCAT ACCCAAGTGG
TGGGCAGGCG AGTACGGGCT CTACTTCATG GGGACCTGGA TCACGGGGAT GGTCGAAGAC
CCGAACGACC TAGACTTCTT CCCCTTACCC GAGAGTAAGG GCGTCGTTGG AGGCGCGGAC
TACGCCTTCG TGCCGAAGTA CTCGAGGAAC GTTGACGCCG CGCTCGACTT CATCAAGTAC
CTCGCCACGG AGGGGCAGGT CGTACACGCG AGCGTACCTT CCGGTAAGAT CCCGACGTGG
ACGAAGGCAC CCGTCGAGAA GCTATGGAAG CCCATGCAGA GTGTATACAC CAAGATCACC
GGCAAGGGGC TAGCCATACT GCCTGACCTC GACGACTCTA TCGGGGGAGA CTGGCAGAAG
CTCTTCTGGG ATCAGCTGAA GCTGTTGTGG GTCAACCCAG GAGCCCTAGA CTCCGTCCTG
AAGACGCTGG AGAGCAGTCA GCCGAAGCCG TCGGGTTAA
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| Protein sequence | MSQQQNRLVL ASIAVGIIAL LVSLYAVVTV QSLASAISDL KASISNLQGT VSSLQQQVGK
ISQQPAPTTP PVQKVKLVVI GPWAGDEAKY FQAVIDAYVK THPNVEIEYR TMRAEDVAAT
MPIQFAAGVA PGDVIFGWAW FIAKMGKEGH LVDLTGIIKE NEYVPGIVDA VKADGKIWGA
PFTMWLKPGF WYRKSFFQKY GLTEPKSYAE FVQLLEKIKG IPGVKNPIAT GDGVGWPISD
IVEHFIIAYG GPQMQLNLIS GKTRFTDPSV RKVFSDYLIP LLQKGYFSEP IEWTTVIPKW
WAGEYGLYFM GTWITGMVED PNDLDFFPLP ESKGVVGGAD YAFVPKYSRN VDAALDFIKY
LATEGQVVHA SVPSGKIPTW TKAPVEKLWK PMQSVYTKIT GKGLAILPDL DDSIGGDWQK
LFWDQLKLLW VNPGALDSVL KTLESSQPKP SG
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