| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1561 |
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| Symbol | |
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| ID | 4601519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1511412 |
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| End bp | 1512170 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639774334 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_920959 |
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| Protein GI | 119720464 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR01247] daunorubicin resistance ABC transporter membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.403911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCTGTGG ACAAGGTGCT CGCGTTCGTC GAGCTGGAGC TGAGGAGGCT ACGCCACGAC
CCCACGGAGG TCTTCACAAG GGCCGTGCAA CCGGCGCTGT GGATAGGGGT CTTCGGCACG
GTGATGAGTA GGGTCAGGGC TATACCAACG GGTAGCGTTG ACTACCTGAC GTTCATAGCT
CCCGGCGTGC TCATGCAGTC AACCTCCTTT ATAGCCATAG CCTACGGCAT AATGCTCGTC
TGGGAGAGGG ACTCGGGAAT ACTCAAAAGG GTCCTCACGT TACCCGTTAA CCGCTTCCTC
ATAGTGCTGG GGCGCTCCCT CTCAGGGGCC ACGAGGGCTC TGTCCCAGCT GTTCGTGGTT
CTCCTCATAG CGCTCCCCCT CGGCGCCAGG CTCAACGTTA ACCCGCTCGC ACTCTGCCTA
GCCGCCCTGG CGGTCTACGT CTGCTCGACG GGCCTCACAG CCCTCTCGAT AATAATGGCG
TCGGCCATGA AGACGAGGGA GAGGTTCATG GGGATCATCC AGGCTATAAC CATGCCGCTT
TTCTTCACAA GCAACGCTCT CTACCCCGTA GAGTTCATGC CGCAACCGCT CCAGTACGTA
AGCCTCTTCA ACCCGCTCAC CTACACTATC CAGGCGCTCC GCGCCTCGCT GATCTACTGC
GACTACTGGT CTACGCTCGC GAATACCGGG ATCCTCGCAA CCTTTTCACT CGCAATGCTC
CTCGCCGCGA CCGCGGCGCT ACCCAGGATA ATAGAGTGA
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| Protein sequence | MAVDKVLAFV ELELRRLRHD PTEVFTRAVQ PALWIGVFGT VMSRVRAIPT GSVDYLTFIA
PGVLMQSTSF IAIAYGIMLV WERDSGILKR VLTLPVNRFL IVLGRSLSGA TRALSQLFVV
LLIALPLGAR LNVNPLALCL AALAVYVCST GLTALSIIMA SAMKTRERFM GIIQAITMPL
FFTSNALYPV EFMPQPLQYV SLFNPLTYTI QALRASLIYC DYWSTLANTG ILATFSLAML
LAATAALPRI IE
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