Gene Tpen_1491 details

Gene Information

• Locus tag: Tpen_1491
• ID: 4601400
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: -
• Start bp: 1441837
• End bp: 1442499
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639774266
• Product: BioY protein
• Protein accession: YP_920891
• Protein GI: 119720396
• COG category: [R] General function prediction only
• COG ID: [COG1268] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.865608
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCACGG CAAGCGTTCC GGCTGTACGT GCTAGGTACA CCAGGATGGG GCTCGTCGCG 
CTCGCCGCGG CTCTCATGTG TGCCTTTGCC CAGGTGAGCT TCAAGGTCGG CCCCGTACCG 
TACACTATGC AGAACGCGGG GGTCGTGCTT GCAGGGCTAC TCCTAGACCC GGCGGACGCG 
GCTACCTCCA TGCTCGTCTA CCTTCTACTC ATAGCTCTCG GGGCCCCTGT AGCGGCGGGG 
CTTAGGGGAG GCCTAGCGGT CCTGCTCGGG TATACGGGCG GCTACCTCCT GGGCTTTGTG 
CCGTCGGCTT TCCTCATGTC CGTACTCTCA AGGCTCTACC TCAGGGGTAG GGGGTTGGAC 
TCCGCGAACC GCCGGGACCT ACTAGTCCTC CTTGCTCTCT CCGCAGTCGC CGTCACGCCA 
ACGTACCTGC TGGGCTTCCT AGTCTTCTCG CTCTACGCTG TGCCGGGATC CAAGCTGTAC 
GCGTGGGCCT CCGGCGTGGC GGGCTGGCTG GGGCTCGGCG GCGCGCCTGG CTGGCTCGTG 
CTGTTCGTAG CCTCGGTCGC TGTCTTTGTG CCGCAGGACT TGTTGATGGA CCACGTGGTA 
GCCGTGCTCG CCGCCAGGGA GGTCGCGAGG CTCTTGAAGG CGAGGGGTAT ACGTGTCGGG 
TAG 

 

Protein sequence

MGTASVPAVR ARYTRMGLVA LAAALMCAFA QVSFKVGPVP YTMQNAGVVL AGLLLDPADA 
ATSMLVYLLL IALGAPVAAG LRGGLAVLLG YTGGYLLGFV PSAFLMSVLS RLYLRGRGLD 
SANRRDLLVL LALSAVAVTP TYLLGFLVFS LYAVPGSKLY AWASGVAGWL GLGGAPGWLV 
LFVASVAVFV PQDLLMDHVV AVLAAREVAR LLKARGIRVG