Gene Tpen_1412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1412 
Symbol 
ID4600729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1365437 
End bp1365985 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content64% 
IMG OID639774187 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_920812 
Protein GI119720317 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.998302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGGA ATAGGCTTAT ATACTTCCGC GCCTCCCAGC CCTTAATGGC TGGACCTATA 
TTCATTCTCA GGGACTACCT GCGGTGCTCG GGTTGCCGCC TCTGCGAAGT GGCGTGTAGC
CTCAAGCACG AGGGGACTGT TTGGCCGGAG GCCAGCAGGA TAAGGGTCTT CGAGTTCTTC
CCGGGGGTCG ACGTGCCTCA CCTCTGCGCC CAGTGCAGGG ACTACCCGTG CGTGAAGGCG
TGCAGGTACT CGGCGCTCAG GGTCGACGAG TCGACGGGCG CCGTCCTCGT CGACGGGGAG
AAGTGCACGG GTTGCGGGGA CTGCGTCAGG GCTTGCCCGG GGAAGGTGAT GAGGCTCCAC
CCGGAGACGA GGAAGGCTAT CGTCTGCGAC TTGTGCGGCG GCGAGCCGGA GTGCGTGAAG
GCATGCCACG AGGCGGGCTT CGACGCGCTC AGGGTTGTAC CCTACACGAG CGTGGGCTTC
AAGGTGTACT CCACTATGCC CGACCAGGTG GCGCAGAGGT TGTTTGAAAC GCTCTTCGGG
GGTGAGTAG
 
Protein sequence
MPRNRLIYFR ASQPLMAGPI FILRDYLRCS GCRLCEVACS LKHEGTVWPE ASRIRVFEFF 
PGVDVPHLCA QCRDYPCVKA CRYSALRVDE STGAVLVDGE KCTGCGDCVR ACPGKVMRLH
PETRKAIVCD LCGGEPECVK ACHEAGFDAL RVVPYTSVGF KVYSTMPDQV AQRLFETLFG
GE