| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1382 |
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| Symbol | |
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| ID | 4600370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1336331 |
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| End bp | 1337248 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639774157 |
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| Product | spermine synthase |
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| Protein accession | YP_920782 |
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| Protein GI | 119720287 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00501465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCACAGCT CTTATATTTT ATTTTTGGGT ATAGTTAACA GGGCGGGGTG GGTCGCTGTG
GGTGGGGAGG AGGGGTTCGA GGGTGTGTAC ATAGTTGAGC CGGCTGGTAG GCATTTGAGG
CTACTCTTCA AGGTGAGCAA GGTCTACGCT CTGGAAAAGT CGCCGTACCA GGAGGTTGTG
CTCGCGGAGC TAGAGGGCTT TGGGAGGGCC TTGCTCCTCG ACAAGTTCAT ACAGAGCACC
GAGAAGGACG AGTACATGTA CCACGAGCTA CTGGTTCACC CAGCGATGGC GGCGCACCCG
GCCCCCGAGA GGGTGCTCGT ACTTGGGGGC GGCGAGGGGG CGACCCTCAG GGAGGTCTTG
AAGCACGGGA CTGTGAAGAA GGCGGTCATG GTGGACATAG ACCCCGTCGT CGTGGAGTTC
TCGAAGAAGC GCCTCGGGCA CATGCACCTC GGTAGCTTCG ACGACCCGAG GGTGGAGGTG
GTCATAGCGG ACGGCAAGGA CTACGTGAGG CAGGCGCCCA GCGGCTACTT CGACGTCGTG
ATAATGGACC TCACGGACCC CTACGCGAGC GAGATCGCGA AGCCCCTATA CAGCCCCGAG
GCCTTCGCCG AGGTTAAGAG GATCCTGAAG CCGGACGGGG TCGTGGCTAC GCAGGCAGGG
AGTAGCTACT TCTACCCCGA GGAGTACAGG TCCGTCCTGG AGAGCGTGAA GAAGTCCTTC
GCCCACGTCT CGGAGTACTG GTTCTGGGTC CCAAGCTTCG GGGTAAACGT GAACTTCATC
GTGGCTTCCG ACGCGTACAG GCTCGAAGAC GTAGTCGGGC TGGTGGACGC GAGGCTCGCC
GAGAGAGGCG TGAAGACCAG GCTACTCACG GGCAGGCTAC TCGAAGGGCT ACTGAAGATA
GGCGTCTTAT ACCCCTAG
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| Protein sequence | MHSSYILFLG IVNRAGWVAV GGEEGFEGVY IVEPAGRHLR LLFKVSKVYA LEKSPYQEVV
LAELEGFGRA LLLDKFIQST EKDEYMYHEL LVHPAMAAHP APERVLVLGG GEGATLREVL
KHGTVKKAVM VDIDPVVVEF SKKRLGHMHL GSFDDPRVEV VIADGKDYVR QAPSGYFDVV
IMDLTDPYAS EIAKPLYSPE AFAEVKRILK PDGVVATQAG SSYFYPEEYR SVLESVKKSF
AHVSEYWFWV PSFGVNVNFI VASDAYRLED VVGLVDARLA ERGVKTRLLT GRLLEGLLKI
GVLYP
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