Gene Tpen_1359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1359 
Symbol 
ID4602196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1313241 
End bp1313969 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content57% 
IMG OID639774134 
Producthypothetical protein 
Protein accessionYP_920759 
Protein GI119720264 
COG category[S] Function unknown 
COG ID[COG5493] Uncharacterized conserved protein containing a coiled-coil domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCCGTGC AAGCTCTTAA AGCCGAGCTC CTGCGCCTAC TCAGGGAGGA CGAGGAGTTT 
AGGCTCGCCG TAGCCGGCCT CCTGGGCCTC GACACAGTAC TGGGCGAGCT GAAGAAGCTG
AGGGAGGACT TCAACAAGCT CGTCGAGCTC GAGAACAGAA GGTGGGAAGA GAACAGCAAA
AGGTGGGAAG AAAACTGGAG AATGTGGGAG GAGAATAGCA AGAGGTGGGA AGAGAACAAT
AAGAGATGGG AGGAGAACAA CAGGAAGTGG GAGGAGGCGT ACAAGAGGTT CGAGGCGATC
GAGGCAGAGC TCAAGGGGCT GAGAGAGGAC TTCAACAGAG GCTTCGACGA GCTCAGGAGG
AGGATAGACG CGCTCGGCGC TAGATGGGGT ATAGCGTCGG AGTCCGCCTT CAGAGAGGGC
ATGAGGGGGG TTATTGAGAG GATCCTCGGC GCCGGGAAGG TTGAAAGGTG GATGTACTAC
GATAGGGAAG GCGAGGTCTA CGGGCACCCG GCAATGGTCG AGGTAGACGT CGCCGTGAAA
GACGGCGAGC ACATACTGAT CGAGGTAAAG TCGAGCGTTT CAAGAGGAGA CGTAGCGGTT
TTCCGGAGGA TCGGAGAGTT ATACGAGAAG GTGAACAGAG TCAAGCCGAG GTTGATCATG
GTATCGCCCT ACGTCGACCC TAGGGCGCTC GAAGACGCGA GAATCCTAGG GGTAGAGATA
TACACGTAG
 
Protein sequence
MAVQALKAEL LRLLREDEEF RLAVAGLLGL DTVLGELKKL REDFNKLVEL ENRRWEENSK 
RWEENWRMWE ENSKRWEENN KRWEENNRKW EEAYKRFEAI EAELKGLRED FNRGFDELRR
RIDALGARWG IASESAFREG MRGVIERILG AGKVERWMYY DREGEVYGHP AMVEVDVAVK
DGEHILIEVK SSVSRGDVAV FRRIGELYEK VNRVKPRLIM VSPYVDPRAL EDARILGVEI
YT