| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1354 |
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| Symbol | |
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| ID | 4602191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1307106 |
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| End bp | 1308806 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639774129 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_920754 |
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| Protein GI | 119720259 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.245938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCTTGC AGGAGTACTG GGGGGTAGTG GAGAGGGTCG TCTCGTCGAG GAACAGGAGA
CCGGTGCGCT ACTCGTACTT CGAGGACGTC TGGAGGGCCG TAGACGAGGG GCACAGGCTG
GTCGTCGTAA GGGCACCCAC TGGTTGCGGC AAGACGGAAG CGGCCACCGC GCCGTTCATC
AGCGACGCGG CTAAAGGCTC GAGGCGCTGG GTCTCGCTCG TCTACGCGCT ACCCACCCGC
TCCCTCGCCT CGGCGATGCT GAGGAGACTG TCCCGCTCGC TGGCCGCGGC GGGGGCGGAG
TGGACCACCG CGACGCTGAG CTACGGGGGC CTCTGGGAGG CCAGGCCGTA CCTCGAGGGG
GACGTGGCAG TCACGACGTA CGACACGCTC CTCCACCAGT TCTACGGCGT CGTCTCCCCG
GGATACCACC TCCTCCTGCC CGCGGCGAAA GTCTCTGGCT CGCTCGTGGT CCTCGACGAG
ACCCACCTGC TCCAGGACGC CCACTGGTAC GCCCCGAGCC TTCTCCCGGC CCACGTCGCG
TCCCTCGTAT CCCTGGGGGC CCAGGTGCTC GTGGTGGGGG CCACGGTGCC GGAGGTCCTG
CTCGAGGAGC TACGGAGGGA GTACAGGCTT GTGAGCCGCG GGGAGGAGCC GGCAGTGGTA
GACGCGGCGG ACGAGCCGGC GAGGGGCAGG CTGGACGTCG AGCTCAGGGG CGGCGGGATG
CCCGTGGAGG GGCTGTGCAG CCTCCTCGAG GGCGCCCCGA GGCCCGCGCT CGTCGTGGTG
AACAAGGTCG AGAAGGCCGT CGAGGCCTAC AGGGCGCTCC GCTCCTGCCT CGGGGGGAGC
GTTGCGCTAC TGCACTCGAG GCTGAGGGGC GGCGTCAGGG CGCGCGTTGA GGGGCTGTTC
GAGGGGGACG GCGCCCCCGG GGACCTAGTC CTGGTCGCAA CCCAGGTCGT GGAGGCGGGG
CTGGACCTCG ACGTGCGCTT CCTCGTGACC GAGGTCTCGC CTGTCGACTC GCTGATACAG
AGGCTGGGCA GGTGCGCGCG GAGGAGCGAC GGCCACGCCG TCGTCTTCCT GGACGAGGAG
GCGGCGCGGA ACGTCTACCC GAGGGAGCTC GTCGAGAGAA CGCTGGGGGT CGTCGACGCC
CAGTCGCTGG CGGAGAGCGT TAGGAGGCTA AGCGTTGCCC GCGAGCTCGT AGACGGGGTG
TACGCGGCGG AGGTCGTCGA GAGGCTTAGG AAGGGGTGGG AGCGCGCCCT GAGCGAGGTG
AAGGGCTGGG CCTTGAGGTT CCCGCGAAGC CTCCTCCACA AGGAAGCGCA CAGAGAGCCG
GGGCCCCTAC TCAGGCTCGG CTACGAGGTC GCCTGCTACC TGCCGGGGAG CGCTGGCGAG
TACGAGGCGT TGCTGGGCGG CGGGGAGACC GCAGTATCCC TGGAAAGGCT CAGGGACTAC
ACCGTGAGGC TGTCCGTGGA GGGGCGCGGA GAGGCCCCGG CGGCCGTCGT CCACGAGGTC
GGCGGCCGCG AAGTCGTCGT CGCGCTCGAG TACAAGCGGG TCGACGGAGG GCTAGCCCTG
AGGGGGAGGC GCATGGAGCC CCGCGCTTTC CCCCGCGCCG TCGAGTCCGG CGAGCTCTTC
CTGCTGAACC CGGCGTTCTA CCTGAGCGAG GGCGGGGACG AGCTCGGGGT GGTTCGGCCG
TGGAGGTCCC GGAGTGCGTA G
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| Protein sequence | MSLQEYWGVV ERVVSSRNRR PVRYSYFEDV WRAVDEGHRL VVVRAPTGCG KTEAATAPFI
SDAAKGSRRW VSLVYALPTR SLASAMLRRL SRSLAAAGAE WTTATLSYGG LWEARPYLEG
DVAVTTYDTL LHQFYGVVSP GYHLLLPAAK VSGSLVVLDE THLLQDAHWY APSLLPAHVA
SLVSLGAQVL VVGATVPEVL LEELRREYRL VSRGEEPAVV DAADEPARGR LDVELRGGGM
PVEGLCSLLE GAPRPALVVV NKVEKAVEAY RALRSCLGGS VALLHSRLRG GVRARVEGLF
EGDGAPGDLV LVATQVVEAG LDLDVRFLVT EVSPVDSLIQ RLGRCARRSD GHAVVFLDEE
AARNVYPREL VERTLGVVDA QSLAESVRRL SVARELVDGV YAAEVVERLR KGWERALSEV
KGWALRFPRS LLHKEAHREP GPLLRLGYEV ACYLPGSAGE YEALLGGGET AVSLERLRDY
TVRLSVEGRG EAPAAVVHEV GGREVVVALE YKRVDGGLAL RGRRMEPRAF PRAVESGELF
LLNPAFYLSE GGDELGVVRP WRSRSA
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