Gene Tpen_1147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1147 
Symbol 
ID4600953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1086583 
End bp1087272 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content65% 
IMG OID639773923 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_920548 
Protein GI119720053 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGACT TGTTGGGGCT TGCGGAGCGG AAGAAGTCGC GCTTAATACT AGCGCTGGAC 
TTCGTTTCCG GCGACCCCGC GGTGTTCGCC GATAGGCTTC TGGCGGCGCT GGAGCCGCTT
GTCGTCGGTG TCAAGGTGGG CCTCCCCTTA GCCTTGAGGA TGGGTTTCAG GGGTGTCTGC
GAGCTCGTCG AGAGGTACGG GTCTGGGTAC TACTTCCTCG CGGACTTCAA GCTTGCCGAT
ATACCGGACG TGGTGAGGGA GGAGTTGGCG CTACTCTCGG AGGCCGGGTT CGACGGCTCC
ATAGTTCACC TCTTCCCCAT GGGGCTCGAG GAGGCTTTGA GCGGGGTTCG CGGGCACGAC
GTGTTCGGGC TTGTCGCCAT GAGCCACGCG GGTTCCAGGT TGCTCGACGA GCACTTCGAG
GACTTGTTGC GCTACGCCTC GAGGCTGGGG ATTAGGGGCG TCGTCGCCCC CGCGACGAAG
CCGGGGCTGG TGGCGCGGGC GAGGGCTTTC CTGCCGGAGG ACTACCTGAT ACTCTCGCCG
GGGGTGGGCG CGCAGGGGGC GGAGCCGGGT AGCGCGCTCA GGCACGGCGC TACCTTCGAG
ATAGTTGGAC GCTCGATAAC GGCGTCCGAG GACTACTACG GCGCGGCGGA GAGGGTAGTG
GAGTCGCAGA GGAGGGTGAT CGGGGAGTGA
 
Protein sequence
MRDLLGLAER KKSRLILALD FVSGDPAVFA DRLLAALEPL VVGVKVGLPL ALRMGFRGVC 
ELVERYGSGY YFLADFKLAD IPDVVREELA LLSEAGFDGS IVHLFPMGLE EALSGVRGHD
VFGLVAMSHA GSRLLDEHFE DLLRYASRLG IRGVVAPATK PGLVARARAF LPEDYLILSP
GVGAQGAEPG SALRHGATFE IVGRSITASE DYYGAAERVV ESQRRVIGE