Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1147 |
Symbol | |
ID | 4600953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 1086583 |
End bp | 1087272 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639773923 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_920548 |
Protein GI | 119720053 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGGACT TGTTGGGGCT TGCGGAGCGG AAGAAGTCGC GCTTAATACT AGCGCTGGAC TTCGTTTCCG GCGACCCCGC GGTGTTCGCC GATAGGCTTC TGGCGGCGCT GGAGCCGCTT GTCGTCGGTG TCAAGGTGGG CCTCCCCTTA GCCTTGAGGA TGGGTTTCAG GGGTGTCTGC GAGCTCGTCG AGAGGTACGG GTCTGGGTAC TACTTCCTCG CGGACTTCAA GCTTGCCGAT ATACCGGACG TGGTGAGGGA GGAGTTGGCG CTACTCTCGG AGGCCGGGTT CGACGGCTCC ATAGTTCACC TCTTCCCCAT GGGGCTCGAG GAGGCTTTGA GCGGGGTTCG CGGGCACGAC GTGTTCGGGC TTGTCGCCAT GAGCCACGCG GGTTCCAGGT TGCTCGACGA GCACTTCGAG GACTTGTTGC GCTACGCCTC GAGGCTGGGG ATTAGGGGCG TCGTCGCCCC CGCGACGAAG CCGGGGCTGG TGGCGCGGGC GAGGGCTTTC CTGCCGGAGG ACTACCTGAT ACTCTCGCCG GGGGTGGGCG CGCAGGGGGC GGAGCCGGGT AGCGCGCTCA GGCACGGCGC TACCTTCGAG ATAGTTGGAC GCTCGATAAC GGCGTCCGAG GACTACTACG GCGCGGCGGA GAGGGTAGTG GAGTCGCAGA GGAGGGTGAT CGGGGAGTGA
|
Protein sequence | MRDLLGLAER KKSRLILALD FVSGDPAVFA DRLLAALEPL VVGVKVGLPL ALRMGFRGVC ELVERYGSGY YFLADFKLAD IPDVVREELA LLSEAGFDGS IVHLFPMGLE EALSGVRGHD VFGLVAMSHA GSRLLDEHFE DLLRYASRLG IRGVVAPATK PGLVARARAF LPEDYLILSP GVGAQGAEPG SALRHGATFE IVGRSITASE DYYGAAERVV ESQRRVIGE
|
| |