Gene Tpen_1097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1097 
Symbol 
ID4600964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp1035674 
End bp1036177 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content53% 
IMG OID639773874 
ProductPTS system sorbose subfamily IIB component 
Protein accessionYP_920499 
Protein GI119720004 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00631969 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAAA AGCAGAACAT CTTTATCCGT ATAGATGACA GGTTTATCCA CGGGCAGGTA 
ACGGCCGCGT GGACGAAGAA GTTCGAGGCA AACGCCATAT GGGTTGTCAA CGATAAAATA 
GCGGGAAACC CAGCCTTGAA GCAGTTGCAA ATAATGCTGG CGCCTCCAGG CATCTCCGTG 
GAGGTTTTAA AGGTAGAGGA GGCCGCCGCC AAGGCGAGGA ACGTAGGGAA TAACACCAGG 
GTTTTAATGC TCTTCGAAAA CCCGATCGAC GTGCTAGCCT TCATCGAAAA GTCCGGCGTA 
AAGGTGGACT GGATACTGGC GGGGCAGATG GGCTACAGGG CTGGGCGCGT CAAAGTAGAG 
AAGACGTTCG ACGTGGGACC GGAGGAGCAC AAAGCGCTAC TAAGACTCCT CGACATGGGC 
ATAAAGGTCT ACTACCAGCA GCTCCCAGAC TTCCCGCCGA AACCCGTCGA CCTCGAGGAG 
AAGCTTAGAA AACTGAAATT CTAG
 
Protein sequence
MEKKQNIFIR IDDRFIHGQV TAAWTKKFEA NAIWVVNDKI AGNPALKQLQ IMLAPPGISV 
EVLKVEEAAA KARNVGNNTR VLMLFENPID VLAFIEKSGV KVDWILAGQM GYRAGRVKVE 
KTFDVGPEEH KALLRLLDMG IKVYYQQLPD FPPKPVDLEE KLRKLKF