Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0976 |
Symbol | |
ID | 4600450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 923204 |
End bp | 925234 |
Gene Length | 2031 bp |
Protein Length | 676 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639773754 |
Product | ferrous iron transport protein B |
Protein accession | YP_920379 |
Protein GI | 119719884 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0370] Fe2+ transport system protein B |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00437] ferrous iron transporter FeoB |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00114707 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGGTAA GAGTAGCACT TATAGGCAAT CCCAACGTTG GCAAAACCTT AATTTTTAAC GATCTGACCG GCGGAAAGGC CCACATTGGA AACTGGCCTG GGAAAACCGT AGAGAAGAAG GAGGGAAAAC TCCTCCACAG GGGTGTAGAG ATCCACATAA CCGACCTGCC TGGAACCTAC AGTCTAACGG CAAAGTCCAT TGATGAGCTA ATAGCGAGAA ACTTCATAGT TGAAGAAAAG CCAGATGTTG TAGTAGATGT AGTCGATGCT TCTAATCTTG AGAGAAACCT CTACCTGGTA CTCCAGCTTC TAGAGCTTGA AGCCAACGTT GTAATCGCGT TGAACAAGTA TGATGTAGCG GAAGACCTTG GATACCAGAT AGACGTGAAC GAACTTTCGA AGTTTCTCGG AGTACCCGTT GTCCCAACGG TTGCGACTAC GAAGCAGGGT ATCGAGGAGC TTAAAGACAC TATAATTGAG GCCGCGAGAA CAAAGGATAA AAGCAAAAAG TTTTCAATTA ATTACGGTAA ACAAATCGAG GAATATATCT CGAAGATGAT GGACATTTTG CAGAAGGATA ATGAGCTCTC AAGCAAATAC CCTGTTAGGT GGCTGGCGAT AAAGATCCTA GAAGAGGACG ACGAGGTTTT AAAGCTTATA GATGAGCGCC CAATCAAAGA TGCCGTAAGA ACCCTACTTT CGGAAGCAAA GAATGCTTTA GGAGAAGACG TAGGAGTCAT CCTTGCCGAA AGGCGGTACT CTCTTATCAG CGAAGCCTTA CCTAAGATCT TGAAGGGCGC GAAGCCGTTA ACTCTTTCGG ACTTACTGGA TAAGGCTTTG CTAGATAAAT ACCTGGGTAT CCCGATATTC TTGGCGTTAT GGTGGGCTCT CTTCAGCTTC ACATTTAACG TTTCGGCTCC ATTTTCGGAC CTGATAGACT GGTTCTTCTC AAAACTTGGA GAGATCGCGG AGACGTACAT CAGCGACCAG CAACTAGCCT CACTCGTGGC TGACGGTATC TTCAGAGGGT TGGGCGGAGT CCTAGCCTTC CTACCCCCGA TATTCTTCCT CTTCTTCGGA TTGGCGCTTC TCGAAGACAG CGGTTATCTG GCTAGAGCCG CTTTCCTAAT GGACAAAGTG ATGTACAAGC TGGGGTTACA CGGGAAATCC TTTATTCCCA TGCTCTTAGG GTTCGGGTGC AACGTTCCAG CAGTCATGGC TACTAGAACC ATTGATAGCG AAGAAGACCG CATACTAACC ATTCTCGTGG CCCCCCTGAT TTCTTGTAGC GCGAGGCTAC CGATATACAT CCTTGTAGGC TCGGCAGTAC TCGGTGAATA CGCGGCAGTG GGCGTTTTCT CCATGTACGT GCTCGGACTA GTACTTGCCG TCCTGGTAGC ACTGTCCTTT AGGAGGCTAC TCCCATACTT CAAAGGCAAG CCTTCCCCGC TGATTCTGGA GCTACCAATG TACGCAAAAC CAACACTGAG AACTACGCTG ATCCACATGT GGGAGAGGGG TAGCCTCTTC TTGAAGAAAG CCGGCACAAT CATTTTCCTC GGAATAGTTG CCGTCTGGTT CCTCTCTAAC TACCCGTGGG AGTCCGTGCA CCAGGGAGAC AGAGTCGTAC TGGAAAACTC CTACCTCGGC GTGCTAGGGA AGTACCTCGA ACCGCTCGTC CGCCCCTTAG GCTTCAACTG GATGCACGCC GTAGCCTTAA TGCTAGGCTT CGTGGCAAAG GAAATCGTCG TCGGGACGTT CGCGACCCTC TTTGGTCTAA CAGCTGAAGG TGAAACCTCG GAAAAATTAA TCGATGCTCT GCGATCAAGC GGGGTATTCA CACCGTTGAC TGGGCTGGCT TTCATGGCTT TCTCCCTAAT CTACATGCCA TGCCTCGCAA CTCTCGCCGC CATTCGCAGA GAAACAGGCT CATGGAAGTG GACGATATTC GCGGTGATCT ACGGACTGGC TTTAGCGTAC TCCGTCGCCT TGGTCATCGT TACTGTTGGT AGGTTACTCG GATATGCCTA G
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Protein sequence | MRVRVALIGN PNVGKTLIFN DLTGGKAHIG NWPGKTVEKK EGKLLHRGVE IHITDLPGTY SLTAKSIDEL IARNFIVEEK PDVVVDVVDA SNLERNLYLV LQLLELEANV VIALNKYDVA EDLGYQIDVN ELSKFLGVPV VPTVATTKQG IEELKDTIIE AARTKDKSKK FSINYGKQIE EYISKMMDIL QKDNELSSKY PVRWLAIKIL EEDDEVLKLI DERPIKDAVR TLLSEAKNAL GEDVGVILAE RRYSLISEAL PKILKGAKPL TLSDLLDKAL LDKYLGIPIF LALWWALFSF TFNVSAPFSD LIDWFFSKLG EIAETYISDQ QLASLVADGI FRGLGGVLAF LPPIFFLFFG LALLEDSGYL ARAAFLMDKV MYKLGLHGKS FIPMLLGFGC NVPAVMATRT IDSEEDRILT ILVAPLISCS ARLPIYILVG SAVLGEYAAV GVFSMYVLGL VLAVLVALSF RRLLPYFKGK PSPLILELPM YAKPTLRTTL IHMWERGSLF LKKAGTIIFL GIVAVWFLSN YPWESVHQGD RVVLENSYLG VLGKYLEPLV RPLGFNWMHA VALMLGFVAK EIVVGTFATL FGLTAEGETS EKLIDALRSS GVFTPLTGLA FMAFSLIYMP CLATLAAIRR ETGSWKWTIF AVIYGLALAY SVALVIVTVG RLLGYA
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