Gene Tpen_0935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0935 
Symbol 
ID4601064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp887495 
End bp888625 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content63% 
IMG OID639773714 
ProductFAD dependent oxidoreductase 
Protein accessionYP_920339 
Protein GI119719844 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.311284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGACG TGGTGATAGT GGGCGGCGGT ATAGTGGGAG TCTCGCTCGC GTACAGGCTA 
GCCGAGGAGG GGGCGGGCAG GGTACTCCTC CTGGAGAAGG GCTACCTCGG CGGCGGCTCA
ACCTTCAGGT GCGCCGGCGG GATAAGGGCC AGCTTCACGA GCAGGGAGCA CATCGTGCTC
ATGAAGAGGA GCATAGAGCT CTGGGGGGAG CTCAGGGAGA AGCTCGGGGT GAAGTACGAG
AGGAGCGGGT ACCTGTGGCT CATCTCGCGC GAGCGGGACG TCGAGAGGTT CAAGGAGTAC
TCCAGGGTGC ACAACAGCTT CGGCGTGGAG ACGCGGTTCG TAGACGAGGA CTTCGTGAAG
AGAGTTGCCC CCTACGTCGA CACGTCGAGC ATGGTGGCCG CCCTCTACGA CCCGCTGGCC
GGCAAGGCTA GCCCATTCGA CGCTGTGTAC AAGCAATTCC TGGCGGCCAG GAGCCTCGGA
GTGGAGTTCG CGGTTGGAAG AGAGGTCGAT AGCGTCCGCG TGGAGAGGGG CGAGGCGAGG
GGCGTAGTTG TGGGCAACGA GCTCATTCCG GCGAGGAGCG TGGTGGTAGC CGCCGGCGCG
GAGTCGGTGT TCCTGCTCCG GAGGTCCGGG GTCGAGTTAC CGCTCGCGCC TGTACCTCAC
CACGCCGCTC TGACCGAGGA GTTCGGGAGG CTGTTCGACC CGCTGATAAT AGACGTCGAG
ACTGGGGCCT ACGCGGTTCA AACGTTCCAC GGCCACGTGT TGATGGGCGT AGAAGTGGAG
GAGGAGCCCT TCGCGAGGCC TGTCGTGAAG CTGGAGTTCC TCGAGAAAGT CGTGTCGACT
TGGAGCAAGT GGCTCACGTG GCTTCCCGGG GCGAACATAC TGAGGTACTG GGTCGGGTAC
TACGAGGTGA CACCCGACCA CCACCCAATA CTGGGCCCCG TCGACGGAGT CGAAAACCTC
TACGTTGCAA CGGGCTTCAG CGGCCATGGC TTCATGATGG CGCCCGTAGT AGCGGAGGAG
CTCGCCGAGT GGATCAAGTC GGGGAAGCCC AAATCGGAGG AAGCCGCCCG GCTGACGCTC
GCCAGGTTCA AGGAGGGAAG GCTGATAAAG GAGCTCGCCG TGATAGGCTA G
 
Protein sequence
MYDVVIVGGG IVGVSLAYRL AEEGAGRVLL LEKGYLGGGS TFRCAGGIRA SFTSREHIVL 
MKRSIELWGE LREKLGVKYE RSGYLWLISR ERDVERFKEY SRVHNSFGVE TRFVDEDFVK
RVAPYVDTSS MVAALYDPLA GKASPFDAVY KQFLAARSLG VEFAVGREVD SVRVERGEAR
GVVVGNELIP ARSVVVAAGA ESVFLLRRSG VELPLAPVPH HAALTEEFGR LFDPLIIDVE
TGAYAVQTFH GHVLMGVEVE EEPFARPVVK LEFLEKVVST WSKWLTWLPG ANILRYWVGY
YEVTPDHHPI LGPVDGVENL YVATGFSGHG FMMAPVVAEE LAEWIKSGKP KSEEAARLTL
ARFKEGRLIK ELAVIG