Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0935 |
Symbol | |
ID | 4601064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 887495 |
End bp | 888625 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639773714 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_920339 |
Protein GI | 119719844 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.311284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGACG TGGTGATAGT GGGCGGCGGT ATAGTGGGAG TCTCGCTCGC GTACAGGCTA GCCGAGGAGG GGGCGGGCAG GGTACTCCTC CTGGAGAAGG GCTACCTCGG CGGCGGCTCA ACCTTCAGGT GCGCCGGCGG GATAAGGGCC AGCTTCACGA GCAGGGAGCA CATCGTGCTC ATGAAGAGGA GCATAGAGCT CTGGGGGGAG CTCAGGGAGA AGCTCGGGGT GAAGTACGAG AGGAGCGGGT ACCTGTGGCT CATCTCGCGC GAGCGGGACG TCGAGAGGTT CAAGGAGTAC TCCAGGGTGC ACAACAGCTT CGGCGTGGAG ACGCGGTTCG TAGACGAGGA CTTCGTGAAG AGAGTTGCCC CCTACGTCGA CACGTCGAGC ATGGTGGCCG CCCTCTACGA CCCGCTGGCC GGCAAGGCTA GCCCATTCGA CGCTGTGTAC AAGCAATTCC TGGCGGCCAG GAGCCTCGGA GTGGAGTTCG CGGTTGGAAG AGAGGTCGAT AGCGTCCGCG TGGAGAGGGG CGAGGCGAGG GGCGTAGTTG TGGGCAACGA GCTCATTCCG GCGAGGAGCG TGGTGGTAGC CGCCGGCGCG GAGTCGGTGT TCCTGCTCCG GAGGTCCGGG GTCGAGTTAC CGCTCGCGCC TGTACCTCAC CACGCCGCTC TGACCGAGGA GTTCGGGAGG CTGTTCGACC CGCTGATAAT AGACGTCGAG ACTGGGGCCT ACGCGGTTCA AACGTTCCAC GGCCACGTGT TGATGGGCGT AGAAGTGGAG GAGGAGCCCT TCGCGAGGCC TGTCGTGAAG CTGGAGTTCC TCGAGAAAGT CGTGTCGACT TGGAGCAAGT GGCTCACGTG GCTTCCCGGG GCGAACATAC TGAGGTACTG GGTCGGGTAC TACGAGGTGA CACCCGACCA CCACCCAATA CTGGGCCCCG TCGACGGAGT CGAAAACCTC TACGTTGCAA CGGGCTTCAG CGGCCATGGC TTCATGATGG CGCCCGTAGT AGCGGAGGAG CTCGCCGAGT GGATCAAGTC GGGGAAGCCC AAATCGGAGG AAGCCGCCCG GCTGACGCTC GCCAGGTTCA AGGAGGGAAG GCTGATAAAG GAGCTCGCCG TGATAGGCTA G
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Protein sequence | MYDVVIVGGG IVGVSLAYRL AEEGAGRVLL LEKGYLGGGS TFRCAGGIRA SFTSREHIVL MKRSIELWGE LREKLGVKYE RSGYLWLISR ERDVERFKEY SRVHNSFGVE TRFVDEDFVK RVAPYVDTSS MVAALYDPLA GKASPFDAVY KQFLAARSLG VEFAVGREVD SVRVERGEAR GVVVGNELIP ARSVVVAAGA ESVFLLRRSG VELPLAPVPH HAALTEEFGR LFDPLIIDVE TGAYAVQTFH GHVLMGVEVE EEPFARPVVK LEFLEKVVST WSKWLTWLPG ANILRYWVGY YEVTPDHHPI LGPVDGVENL YVATGFSGHG FMMAPVVAEE LAEWIKSGKP KSEEAARLTL ARFKEGRLIK ELAVIG
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