| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0895 |
|---|
| Symbol | |
|---|
| ID | 4600472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 845646 |
|---|
| End bp | 846254 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639773674 |
|---|
| Product | hexapaptide repeat-containing transferase |
|---|
| Protein accession | YP_920299 |
|---|
| Protein GI | 119719804 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAGCT CGCGCAAGTA CTTCGCACAC CCTACAGCCG TAGTGGAGGA GGGAGCCGAG
ATAGGGGAGG GAACCCGTAT ATGGCACTTC GCCCACGTTA GGAGCGGTGC GCGTATAGGG
AGGAACTGTA ACATCGGCAA GGACGTTTAC GTCGATCAGG GCGCCGTTAT CGGGAACAAC
GTGAAGATTC AGAACGGTGT AAGCGTCTAC AGGGGGGTGG TTATAGAGGA TAACGTCTTC
GTTGGACCCT ACGCGGTGTT TACCAACGAC AAGTATCCGA GGGCTTTCTC GACTGACTGG
GAAGTCGTGC CCACGGTCGT CAAGGAGGGA GCGTCCATAG GGGCTAATGC TACCATAGTC
TGCGGCGTGA CTATAGGTAG GTACGCGATG GTAGCCGCGG GGAGCGTGGT GACGCGCGAC
GTACCGGACC ACGCGCTGGT AGCTGGCAAC CCCGCGAGGA TAGTTGGCTT CGTCTGCTAC
TGTGGGAGAC CCTTGAAGAG GCTCGTGGGG GAGAGGGATG GCAACGTGGT TCTTCAGTGC
GACCACTGCG GAAGGGAAGT CTCGATCCCG AAGAGCATAT ACGAGAAGGC GCTTGAGGAA
AAGAAGTAG
|
|---|
| Protein sequence | MSSSRKYFAH PTAVVEEGAE IGEGTRIWHF AHVRSGARIG RNCNIGKDVY VDQGAVIGNN
VKIQNGVSVY RGVVIEDNVF VGPYAVFTND KYPRAFSTDW EVVPTVVKEG ASIGANATIV
CGVTIGRYAM VAAGSVVTRD VPDHALVAGN PARIVGFVCY CGRPLKRLVG ERDGNVVLQC
DHCGREVSIP KSIYEKALEE KK
|
|---|
| |