Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0881 |
Symbol | |
ID | 4600824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 828636 |
End bp | 829760 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639773659 |
Product | radical SAM domain-containing protein |
Protein accession | YP_920285 |
Protein GI | 119719790 |
COG category | [R] General function prediction only |
COG ID | [COG1313] Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.607875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGTTTA GGGAGGAATA CGAGTACATA TCGCTCATAA GGCCCGACTC GGTGACCGTT TGGGAGTACC CCGAGGTCAG GGAGAGGCTT TCACACTACC TCGGCGTGCT CAGGGGTGAG AAGCCGGCGC GCTACCGCGT TGCCAGAAGA ATGCCCGTAG ATTACGATGA AAAGGCGCCC CTCGAGGAGC TTCTCGACGT GCATAGGAGC TACTCCAGAG ATTTTGAAAA GGTTTACGCG GAGTCCGTGG AGAAGGGCTT GGAGAAGAAT TTGCCGAGCA AGTCGTACCT CGACTTGAAG ATCGAGATCG CAAAGAGAAT GCTTCGTAGC TGCTTTTTCT GCGAGTGGCG TTGCATGGTG AACAGAGAGG AGGGCAAGAG GGGCGTCTGC GGGCTAGGCA AGGAGGTGCG TGTTGCTAGC GCTTTCCTCC ATGTCGGGGA GGAGGCGCCG CTAGTACCGT CCGGGACAAT TTTCTTCACG GGTTGTAGCT TCAAGTGCGT GTATTGCCAG AACTGGGATA TCTCCACCAG GGTTGATAAC GGCGAGAAGG TTACTCCACA GGAGCTCGCA GGAATAGCCA CCGCCCTGTA CCTCAGGGGG GCCAGGAACA TTAACTACGT GGGCGGGAAC CCGGATCAGC AGCTCCACGT TATACTCGAG TCGTTGCGCT ACATGGACGT AAATGTCCCA CTGCTGTGGA ACTCCAACAT GTACATGTCG CAGGAGGCTC TATCACTGCT CCTAGACGTG GTGGACATAT GGCTACCGGA CTTCAAGTAC GGTAATGACG ATTGCGCTAG GAGGCTCTCC GGGGTTCCAA GGTACTTCGA GGTTGTTTCG AGAAACCACA AAGTAGTCTG CGACGCAGGC AGAGACATAA TCATCAGGCA CCTGGTGCTC CCGTCGCACG TAGAGTGCTG CACCAAGCCC GTCCTGAAAT GGATCTCGGA AAACTGTCCA AGAGCGCTTG TCAACGTGAT GGACCAGTAT AGGCCCGAGC ACCTCGTGGC GAGGTTCCCA CAAAGGTGGC CCGAGATAGC TAGGCGCCCA ACCGCTAGCG AAATAAGAGA GGCCTACGAG TACGCGGATA GGCTGGGTCT AGCATGGAGG CCGGTCTCTC TGTAG
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Protein sequence | MRFREEYEYI SLIRPDSVTV WEYPEVRERL SHYLGVLRGE KPARYRVARR MPVDYDEKAP LEELLDVHRS YSRDFEKVYA ESVEKGLEKN LPSKSYLDLK IEIAKRMLRS CFFCEWRCMV NREEGKRGVC GLGKEVRVAS AFLHVGEEAP LVPSGTIFFT GCSFKCVYCQ NWDISTRVDN GEKVTPQELA GIATALYLRG ARNINYVGGN PDQQLHVILE SLRYMDVNVP LLWNSNMYMS QEALSLLLDV VDIWLPDFKY GNDDCARRLS GVPRYFEVVS RNHKVVCDAG RDIIIRHLVL PSHVECCTKP VLKWISENCP RALVNVMDQY RPEHLVARFP QRWPEIARRP TASEIREAYE YADRLGLAWR PVSL
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