Gene Tpen_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0872 
Symbol 
ID4600354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp822390 
End bp822860 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content57% 
IMG OID639773650 
Productpyruvoyl-dependent arginine decarboxylase 
Protein accessionYP_920276 
Protein GI119719781 
COG category[S] Function unknown 
COG ID[COG1945] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00286] arginine decarboxylase, pyruvoyl-dependent 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCTCC CGAAAAAGTA CTTCGTAACG AAGGGTAAGG GGCTGAGCAA CGTATCGCCG 
CTGATGGCGT TCAACAATGC GTTGAGAGAG GCCGGTATAC ACCAGTTGAA CCTTGTGCCC
GTCTCCTCCA TCCTTCCACC GGAGGTCGAG GAGGAGAGCC CCAGGAGGCT TCCAGCCGGC
AGTATAGCGT TCGTCGTTAT GAGCGAGAAG AGAGCGAAGG GTCCGGCGAG GATAAGCACC
GGCATATCCT GGGCTCGCGG AAAGCCCCAC GGGTACGTCA TAGAGTTCCA CGACGGCAAC
AGCTCGGCCG AGACCTCAAG CAACCTTTCG GCGATGTGGA GTGAGATTAG GCTGAGAGAC
GTTCTTGAGC TCGAAGAGCC TCGCTACCTG GTAGAGGAGC TCGAAATCCC TCCAGGCTAC
TACGGTAGCG TCGTGGTGGC GCTGGTCTTC AGCGATTATA GCTTCCTCTA G
 
Protein sequence
MLLPKKYFVT KGKGLSNVSP LMAFNNALRE AGIHQLNLVP VSSILPPEVE EESPRRLPAG 
SIAFVVMSEK RAKGPARIST GISWARGKPH GYVIEFHDGN SSAETSSNLS AMWSEIRLRD
VLELEEPRYL VEELEIPPGY YGSVVVALVF SDYSFL