Gene Tpen_0713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0713 
Symbol 
ID4601594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp662259 
End bp663107 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content54% 
IMG OID639773488 
ProductABC transporter related 
Protein accessionYP_920118 
Protein GI119719623 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGGCG TGGAGGAAGC AATTATAGAG GTCAAGGACG TCTACTACGC CTACCCCGGG 
GGTTACGAAG CACTGAGAGG AGTGACCCTC GAAGTTAGAA GGGGGGAGTT CATCGCGATA
ATGGGGGAAA ACGGCGCGGG CAAAACTACC CTAATCAAGC ACTTTAACGG CATCCTTAAG
CCCAGCAAAG GCACGGTCAA GGTCAAAGGG ATTGACACCA GGACGAAGAG TGTAGCAGAG
CTCTCGAGAA TAGTGGGCAT AGTATTCCAA AACCCTGACC ACCAGCTCTT CGAGGAAACA
GTGTACGATG AAGTCGCCTT CGCTTTAAGG AACTTCGGCT ACAGCGAGGA CGTCATCGAG
AGAAGAGTGG CGTGGGCGCT CAACATACTC GACCTGCAAC GCTACAAGGA CAGGTCTCCC
TATTCCCTAA GCGTGGGTGA GAAAAGACGG CTCGCGCTAG CCTCCGTGCT GGCGTACGAC
CCCGAGGTGC TCGTTCTAGA CGAGCCGACG GCCGGCCAGG ACTACCTACA GAAGGAGAAG
ATCTCGCAAA CCATGAACCT GCTGAGACTC ATGGGTAAGA CTGTTGTAAT CGTGACCCAC
GACGTGGAAT TCGTGACGTC GTACGTAGAC AGAATAGTCG TGATGTCCGG TGGAAAAGTG
ATCGCCGAGG GGCAACCCAG AAAGATACTA GCGAACTACG CTGTCCTCAG AAAGGCAAAC
CTAGTTCCCC CCCAAATAGT TAGGGTGGCG CGTGCACTCT ACGGAAAGTC TCTCCTGGAA
AGGTACGACT ACCTGTCCCC GGAGGAACTC TTCAACGACT TACGCAGAAT CATGGGCAAT
ACGCGGTGA
 
Protein sequence
MKGVEEAIIE VKDVYYAYPG GYEALRGVTL EVRRGEFIAI MGENGAGKTT LIKHFNGILK 
PSKGTVKVKG IDTRTKSVAE LSRIVGIVFQ NPDHQLFEET VYDEVAFALR NFGYSEDVIE
RRVAWALNIL DLQRYKDRSP YSLSVGEKRR LALASVLAYD PEVLVLDEPT AGQDYLQKEK
ISQTMNLLRL MGKTVVIVTH DVEFVTSYVD RIVVMSGGKV IAEGQPRKIL ANYAVLRKAN
LVPPQIVRVA RALYGKSLLE RYDYLSPEEL FNDLRRIMGN TR