| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0706 |
|---|
| Symbol | |
|---|
| ID | 4601380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 657095 |
|---|
| End bp | 657580 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639773481 |
|---|
| Product | PUA domain-containing protein |
|---|
| Protein accession | YP_920111 |
|---|
| Protein GI | 119719616 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1370] Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.924109 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAGAG AGAAGCCTTC ACCCTGGGAG CGCAAGGCGC TTCAAAGGCT ACTACTTTAC
CAGTTTGGAG TGGACTTCGA CTTGGAGAGA CTCGGGGACA AGCTATCCGT TGAGAGGTCG
CGTAGGACGG GACGTATAAG GAAAATCTTC GTAGGGGACA CTCTTTTCGC GTCCGTAAGG
CTGTCGGACG GCTTCATCGT ACCCACGCCG GAGGGGTGGA GGCTACTGCT CTCTGTTAGG
CGCTGTTACT TCGTAGAGGT CCCCGAAGAC GTCGCTCGGT ACGTTTCTCA GGGAAGGACG
GTCTTCTCTA AACACGTGAT TGAAGCCGAT CGAGAGATTC TCCCCGGAGA CGAGGTGGCC
GTGATTTCTG GAGAAGAGGC TCGCGTAAGT GGCTCGGGCA AAGCCATGTT GCCTGGAGAC
TCTATGGGGG TTATACGTAG AGGGAAAGCT ATCAAGACAC GTACGGGTGC AGGAGAATCT
GAGTAA
|
|---|
| Protein sequence | MEREKPSPWE RKALQRLLLY QFGVDFDLER LGDKLSVERS RRTGRIRKIF VGDTLFASVR
LSDGFIVPTP EGWRLLLSVR RCYFVEVPED VARYVSQGRT VFSKHVIEAD REILPGDEVA
VISGEEARVS GSGKAMLPGD SMGVIRRGKA IKTRTGAGES E
|
|---|
| |