Gene Tpen_0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0688 
Symbol 
ID4601888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp638428 
End bp639105 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content51% 
IMG OID639773461 
Productcytidyltransferase-like protein 
Protein accessionYP_920093 
Protein GI119719598 
COG category[I] Lipid transport and metabolism
[S] Function unknown
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0615] Cytidylyltransferase
[COG1849] Uncharacterized protein conserved in archaea 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAACGCG AAGGTAAATG CGAAGAAAAA GCAGAGCGGT ACATCGCCAA CGTGGAGAGA 
GCCTTAGAGA GCCTGAAGGT GGTTCTTCCA GAAGGTGGGG TCGAGGAAAC ACTGCGACTT
GTAAGAGGCT ATGTCAGTGA CGCAAGGTTC TACTTGGAAA AGGGTGACTG TGAAACATCG
ATTGCCTGTT CCTCCTACGC CGAAGGGTTG CTCGACGCTC TAAGATTCCT TGGGAGGGTT
ACGTTCGAAT GGCCCTCAGT GCCTTCTCGC CGGAAAAGAG TTCTGGTAGG AGGAGTCTTC
GACCTGCTAC ACCCAGGACA CATTTACTTT CTTAGGAGGG CCAGCGAGCT GGGCAACGTA
TACGTGGTGG TAGCACGCGA CAAGACGGTT ATCGACACAA AAGGTAGGCA ACCCTTGTTT
TCGGAGGAAG AACGATTAGA AATGCTTAAA GCGCTCAAGT TTGTCTCCGA TGCGTTTCTG
GGAGACTATC CCCCGAACTT CGCAAACGCT CTTAGAAGGG TTAAACCGGA CATAGTGTTC
CTGGGTGCAG ATCAGGGAGG GCTTCTACCT ATCGTTGAGA AGGCTGTTCA GGAAGCCGGG
CTAAACGTAG AGATAAAAGT GCTAGACAAA AGACTGAATG ACTACTCGTC GACAAAGTAC
AAGTCACTAC TGCTGTAG
 
Protein sequence
MEREGKCEEK AERYIANVER ALESLKVVLP EGGVEETLRL VRGYVSDARF YLEKGDCETS 
IACSSYAEGL LDALRFLGRV TFEWPSVPSR RKRVLVGGVF DLLHPGHIYF LRRASELGNV
YVVVARDKTV IDTKGRQPLF SEEERLEMLK ALKFVSDAFL GDYPPNFANA LRRVKPDIVF
LGADQGGLLP IVEKAVQEAG LNVEIKVLDK RLNDYSSTKY KSLLL