| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0679 |
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| Symbol | |
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| ID | 4601879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 627880 |
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| End bp | 630036 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639773452 |
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| Product | AAA family ATPase, CDC48 subfamily protein |
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| Protein accession | YP_920084 |
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| Protein GI | 119719589 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family
[TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.497403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAGTG AGGTTGTTTT GAGGGTTGCG GAGGCTCGTT CAAGGGACGT TGGAAGAGGC
ATAGTTAGGA TAGACAGGAA TGCAATGGCA AAACTGGGAG TAGAGCCGGG GGACATAGTC
GAAATCGAAG GGAAAAAGGT GACAGTAGCC ATCGTGTGGC CTCAAGCGCT GGAGGACGAG
GGAGCCGGGA TAATAAGGAT GGACGGCCTA ATAAGAAAGA ACGCCGGCGT AGGCATAGGG
GATACCGTAA AGGTTAGGAA GGCCAAGGTT GCTCCCGCCA AGAGAGTGGT TCTCGCACCC
TCGTACCGCA TAGGCCTAGA GGTTACGCCG GACCTTGTAG AGTACGTGAA GAGCAAGCTA
ATAGGGCGCC CGGTGATTAG GGGAGACGTA GTAGAGATAC CGATATTCAG TACTGCGCTC
CAGCTAACAG TCGTCACCAC GATGCCAGCG CAGGCCGTGC AGATCACGGA GGACACGGAG
ATCACCATTC GGGCGGAACC TGTCAGTGGA GAGATAGGCA TACCTCGCAT AACCTACGAG
GACATAGGGG ACTTGGAGGA GGCTAAGCAG AAGATTAGGG AGATGGTTGA GTTGCCGTTA
AGGCACCCAG AGCTCTTCAA GCACCTGGGC ATAGAGCCCC CGAAGGGTGT TCTCTTCTAC
GGTCCTCCGG GTACCGGTAA GACCCTCCTA GCGAAGGCTG TGGCGAACGA GACTGGCGCG
TATTTCATAG CTATTAATGG CCCGGAGATT ATGAGTAAGT TCTACGGTGA GAGCGAGCAG
AGACTCAGAG AGATATTCGA GGAAGCGACG AAGAACGCTC CTGCGATTAT CTTTATCGAC
GAGATAGACG CCATAGCCCC CAAGAGAGAA GAAGTCACAG GAGAAGTAGA AAAAAGAGTA
GTAGCACAGC TACTAGCACT AATGGACGGG CTCAAGGAGA GAGGGCAAGT GATAGTCATA
GCCGCCACGA ACAGGCCCGA CGACATAGAC CCTGCGCTTA GAAGGCCCGG CCGCTTCGAC
AGGGAGATAG CGTTCCCCGT CCCCGACAAG AGGGCCAGGC GGGAGATACT ACAGGTGCAT
ACGAGAAACA TGCCACTAGC AGAGGACGTC AATCTAGACG AGCTCGCGGA GATTACGCAC
GGCTTCACCG GTGCTGACCT CGCAGCGCTT TGCCGCGAAG CCGCTATGCA CGCGCTGAGA
AGATTCCTTC CGAAGATCGA CATCGAGAGT GAAAAGATCC CAACGGAGAT ACTAAAGGAG
CTGAAAGTCA CGCGGGAAGA CTTCATGCAG GCCCTGAAAG ATGTGCAACC GAGCGCCTTA
CGAGAGGTCT ACATAGAGGT TCCAGAGGTC CACTGGGACG ACATCGGAGG GCTGGAAGAC
GTCAAGCAAC AACTAAGAGA GGCTGTCGAG TTGCCGTTAA GGCACCCAGA GTACTTCCGC
GAAATGGGCA TCGATCCTCC GAAGGGTATA CTGCTCTACG GTCCTCCGGG TACCGGTAAG
ACCCTCCTAG CAAAAGCCGT AGCAACAGAG AGCGAGGCGA ATTTCATAGG CGTTAAGGGA
CCGGAGATCC TGAGCAAGTG GGTTGGCGAA AGCGAAAAAG CTGTACGCGA GATATTCAGA
AAGGCGAGGC AGGCGGCCCC ATGCGTGATA TTCTTCGACG AAATAGACTC TATCGTGCCA
AGGAGGGGAC AGAGGTTTGA CTCGGGCGTT ACGGACAGAA TTGTCAATCA GCTTTTGACT
GAGATGGATG GTTTGGAGAG GCTTGAGGGT GTTGTTGTTA TTGCTGCTAC TAATAGGCCT
GACATTATTG ATCCTGCTTT GCTGAGGCCT GGCAGGTTTG ATAGGTTGAT CTACGTGCCT
CCACCAGACG AGAAGGCTAG ACTCGAGATA CTCAAGGTTC ACACTAGGAG AATGCCTCTA
GCCGAAGACG TAGACCTAGC AGAAATAGCG AGAAAAACAG AAGGATACAC AGGCGCAGAC
CTCGCGGCAG TATGCAAGGA GGCAGCCCTC GCGGCACTCC GAGAAGCTGG AAAACCGACT
AAGGTGACGA AGCGGCACTT CGAACAAGCT CTACAAATAG TAAAGCCGAG TGTCACTAAA
GAGGACATAG AAAGGTACAA GAGGATATCC GAGGAGTTTA GGAGGATGCT TAGCTGA
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| Protein sequence | MSSEVVLRVA EARSRDVGRG IVRIDRNAMA KLGVEPGDIV EIEGKKVTVA IVWPQALEDE
GAGIIRMDGL IRKNAGVGIG DTVKVRKAKV APAKRVVLAP SYRIGLEVTP DLVEYVKSKL
IGRPVIRGDV VEIPIFSTAL QLTVVTTMPA QAVQITEDTE ITIRAEPVSG EIGIPRITYE
DIGDLEEAKQ KIREMVELPL RHPELFKHLG IEPPKGVLFY GPPGTGKTLL AKAVANETGA
YFIAINGPEI MSKFYGESEQ RLREIFEEAT KNAPAIIFID EIDAIAPKRE EVTGEVEKRV
VAQLLALMDG LKERGQVIVI AATNRPDDID PALRRPGRFD REIAFPVPDK RARREILQVH
TRNMPLAEDV NLDELAEITH GFTGADLAAL CREAAMHALR RFLPKIDIES EKIPTEILKE
LKVTREDFMQ ALKDVQPSAL REVYIEVPEV HWDDIGGLED VKQQLREAVE LPLRHPEYFR
EMGIDPPKGI LLYGPPGTGK TLLAKAVATE SEANFIGVKG PEILSKWVGE SEKAVREIFR
KARQAAPCVI FFDEIDSIVP RRGQRFDSGV TDRIVNQLLT EMDGLERLEG VVVIAATNRP
DIIDPALLRP GRFDRLIYVP PPDEKARLEI LKVHTRRMPL AEDVDLAEIA RKTEGYTGAD
LAAVCKEAAL AALREAGKPT KVTKRHFEQA LQIVKPSVTK EDIERYKRIS EEFRRMLS
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