Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0649 |
Symbol | |
ID | 4601516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 600362 |
End bp | 600964 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639773422 |
Product | ZPR1-related zinc finger protein |
Protein accession | YP_920054 |
Protein GI | 119719559 |
COG category | [R] General function prediction only |
COG ID | [COG1779] C4-type Zn-finger protein |
TIGRFAM ID | [TIGR00310] ZPR1 zinc finger domain [TIGR00340] ZPR1-related zinc finger protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000551217 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTCCC AGAGTTCCGG GGAGGGTGGC GTTGAAGGTG TCGAGCAGGT AGCAGGAGAC GGAGAGAACG TGACAGAGTA CGGGAGGTTG CTCGGCGAGT TTGAAGACGT TTGCCCTGTG TGCGGCGGAC CTCTGAAGGT AAGAGAAGTA GAGTACATGC TGCCCAGCCT GGGAAAGACA TTGCTTGTCT CGAAGAAGTG CGCGAAGTGC GGTTATAAGA GAACAGACAT AGTGCCTCTG TCCTTCCAGA GACACACCCG CGTGTACTTA AGGGTGGAAA AAAAGGAGGA TCTCTACATA AAGGTAGTTA GGTCGCCTAC CGCTAGAATA TTCATACCCG AGCTAGGCCT AGAGCTACGC CCGGGACTTG ACGCAGAAAT GTTTGTAACG AACGTGGAAG GAGTGCTACA ACTCTTCAAG GACGCCTTGC TACGCTTGAA GACCCTGGAC GAAGAAGCCC GGGTAGACGA CATGGTCAAA CTCCTAGACA GTATAGCAGA GGGGGACTTC ACCCCTTTCA CGCTGATTCT CGACGACGTG TACGGTGTAA GCGCAGTAAT CGCCGGGCCT CACTCCCGCG TAGCTATAGA AAACGCGGAC TAG
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Protein sequence | MSSQSSGEGG VEGVEQVAGD GENVTEYGRL LGEFEDVCPV CGGPLKVREV EYMLPSLGKT LLVSKKCAKC GYKRTDIVPL SFQRHTRVYL RVEKKEDLYI KVVRSPTARI FIPELGLELR PGLDAEMFVT NVEGVLQLFK DALLRLKTLD EEARVDDMVK LLDSIAEGDF TPFTLILDDV YGVSAVIAGP HSRVAIENAD
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