Gene Tpen_0649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0649 
Symbol 
ID4601516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp600362 
End bp600964 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content54% 
IMG OID639773422 
ProductZPR1-related zinc finger protein 
Protein accessionYP_920054 
Protein GI119719559 
COG category[R] General function prediction only 
COG ID[COG1779] C4-type Zn-finger protein 
TIGRFAM ID[TIGR00310] ZPR1 zinc finger domain
[TIGR00340] ZPR1-related zinc finger protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000551217 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTCCC AGAGTTCCGG GGAGGGTGGC GTTGAAGGTG TCGAGCAGGT AGCAGGAGAC 
GGAGAGAACG TGACAGAGTA CGGGAGGTTG CTCGGCGAGT TTGAAGACGT TTGCCCTGTG
TGCGGCGGAC CTCTGAAGGT AAGAGAAGTA GAGTACATGC TGCCCAGCCT GGGAAAGACA
TTGCTTGTCT CGAAGAAGTG CGCGAAGTGC GGTTATAAGA GAACAGACAT AGTGCCTCTG
TCCTTCCAGA GACACACCCG CGTGTACTTA AGGGTGGAAA AAAAGGAGGA TCTCTACATA
AAGGTAGTTA GGTCGCCTAC CGCTAGAATA TTCATACCCG AGCTAGGCCT AGAGCTACGC
CCGGGACTTG ACGCAGAAAT GTTTGTAACG AACGTGGAAG GAGTGCTACA ACTCTTCAAG
GACGCCTTGC TACGCTTGAA GACCCTGGAC GAAGAAGCCC GGGTAGACGA CATGGTCAAA
CTCCTAGACA GTATAGCAGA GGGGGACTTC ACCCCTTTCA CGCTGATTCT CGACGACGTG
TACGGTGTAA GCGCAGTAAT CGCCGGGCCT CACTCCCGCG TAGCTATAGA AAACGCGGAC
TAG
 
Protein sequence
MSSQSSGEGG VEGVEQVAGD GENVTEYGRL LGEFEDVCPV CGGPLKVREV EYMLPSLGKT 
LLVSKKCAKC GYKRTDIVPL SFQRHTRVYL RVEKKEDLYI KVVRSPTARI FIPELGLELR
PGLDAEMFVT NVEGVLQLFK DALLRLKTLD EEARVDDMVK LLDSIAEGDF TPFTLILDDV
YGVSAVIAGP HSRVAIENAD