Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0601 |
Symbol | |
ID | 4601221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 554839 |
End bp | 555888 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639773376 |
Product | inner-membrane translocator |
Protein accession | YP_920009 |
Protein GI | 119719514 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCCCC TAATGTTCCT AGTTGACCTA GGAGTTCTGT ACTCGGTGTA CGTTATCCTA GCATCGTCTT TGAACCTCGA ATACGGGGAG CTAGGGCTAC CTAACTTCGC CAAGTCCGCC TTCTTCGCGG TTGGAGCATT TTCCGTAGGG GCTCTCTCCG TCAGGCTTGG AACCCTTCTT CTAGGGATCA CCATGGAGGG AGAATTCAAG CTGAAAAGCG TGTACTACGC TACGCTTGTC TCGCAAGCAC TCGTCAACTC TCCTCAGCTC GGCGTTATAC TCTTCGTTGT TCCCCTTATG ATAGCCGTGC CCCTGGCCGC TCTGCTGGGA GTACTCGCTT CATACCCTGC CTTAAGGCTC CGGGAAGACT ACCTGGGAAT GTTACTCATA GCGTTCAGTG AGATAATCAG GGTGGTCGCC AGGAACTACG AACCCCTCGT AGGCGGTACT TACGGAGCCG GCGTCGTAGA CTTCCTCGCT TGGATACCTC CTCCATTGAA GCAGGTAGTC CTCCTGGCGT TATCGTCTTC GATCGCCTTT GCGATTTGGT TAGCCTACTA CAGGCTTTCG AGGTCGCCTT TCGGGAGAGT CTTGAGGGCT ATACGGGACA ACGAACTCGC GGCTTCTGTG CTCGGGAGAG ACGTAGCCAA GATGAGAATG ACCGTAATGG CTCTGGGATC CGGGATGGCA GCCGTTGCCG GTGTGCTCTA TGCGTTCTAC GTAGGGTCTG TAAACCCGGA CGACTTCACG ATTTCGAAAA CGTTTTTGGT AGCATTGATG GTGATAATTG GTGGGAGAGG AAACCCTTAC GGGGCACTTG TAGGCCCGGC AACGTACATA GCGGTAGACA GGTCTATACA GTTCGTGAAG CAGTACTTAG CGTTGCCGTT CGACCCGAAC TACGCTTCCT ATGTTATTCT CGGCGTAGCC TTAATCCTCA TAGTAATGAA AAAGCCGGAA GGCATTGCTC CGGAGAAACC AGCAATCACG TTGCCAAGCG CCCTACGCCG GGCTCTATCG CCACGACACA CTGTGCCAAA GCCCGATTAG
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Protein sequence | MDPLMFLVDL GVLYSVYVIL ASSLNLEYGE LGLPNFAKSA FFAVGAFSVG ALSVRLGTLL LGITMEGEFK LKSVYYATLV SQALVNSPQL GVILFVVPLM IAVPLAALLG VLASYPALRL REDYLGMLLI AFSEIIRVVA RNYEPLVGGT YGAGVVDFLA WIPPPLKQVV LLALSSSIAF AIWLAYYRLS RSPFGRVLRA IRDNELAASV LGRDVAKMRM TVMALGSGMA AVAGVLYAFY VGSVNPDDFT ISKTFLVALM VIIGGRGNPY GALVGPATYI AVDRSIQFVK QYLALPFDPN YASYVILGVA LILIVMKKPE GIAPEKPAIT LPSALRRALS PRHTVPKPD
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