Gene Tpen_0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0541 
Symbol 
ID4600498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp491573 
End bp491836 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content56% 
IMG OID639773312 
Productpyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit 
Protein accessionYP_919950 
Protein GI119719455 
COG category[C] Energy production and conversion 
COG ID[COG1144] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit 
TIGRFAM ID[TIGR02179] 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGGGCA CTGCGAGTAA GCTTCTGGCT AAACCGGTAG TTGGGGCTGT TGCAGCGGGT 
AGCTGGCGCA CCGAGAGGCC CGTCGTAGAC ATGTCTAAGT GTAGGCTGTG CGGGGTCTGC
TGGCTCTACT GCCCCGACGG AGTTATAGAG ATCGACGAGG ATGCAAGGCT CGTTAAGATA
GACTACGACT ACTGTAAAGG TTGCGGTGTA TGCGCCGCTG AATGCCCCTT CAAGGCTATA
AGCATGGTGA GGGAGCATGA GTGA
 
Protein sequence
MSGTASKLLA KPVVGAVAAG SWRTERPVVD MSKCRLCGVC WLYCPDGVIE IDEDARLVKI 
DYDYCKGCGV CAAECPFKAI SMVREHE