Gene Tpen_0482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0482 
Symbol 
ID4601877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp438948 
End bp439634 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content50% 
IMG OID639773251 
Producthypothetical protein 
Protein accessionYP_919894 
Protein GI119719399 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.133167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATAAGCT TTAAGGTAGA GTTAGTCCTC AAGAAAGCCG CAGAACTTCT TTCCCGGGGT 
AAGGTAGCCA GCATCACCGA GATAGTGTCT GAAACTGGTC TTCCACAGGA GTTCGTCCAG 
CTGGTCCTAG AAAGCCTAGA AATACCCGTA GTCAACGGCT ACATCGAAGA GTCTCTACCG 
GGGGTTCTCG TTAAGGCTTG GCTACACGGC TACGACGTTG TATCCTTGGC GTTAAGCTCC 
GGGTGGAGTA GCTTTGAGGA ACTCTGCTGC TACCTAGCGG AAAGCTTCGG GCTTAGGACC 
AAGCGGAATC TCCGCTTTAA AAACTTAGGA AGAAGATTCG AGGTAGACCT TATAGCTGCG 
AGCGACAACC TCGTATTAGT TGTTGACTGT AAGAGGTGGC GAAGAGCCCC GCCGTCTTCT 
CTGAAAAAAG CCGCGAAAGC GCATCTTGAA CGGTGCTTAG CGCTGGCTGA CAAAATGAAG 
TCGGGAGCAG ACATAGGAAT ACGGCTAGGT AAACAAGCTA AGCTCTACCC GTTGATAGTC 
AACCTCTACG ACGTAGGTCC CCTAGTGGAG GAAGGTGTGC TCATACTAGG CCTGAAGGAG 
TTCAAAGAGA TTCTTCAGTC CCTAGACCCT CTGCTCTTAG AGGAGATGGG AGCAAAGTCG 
ATAACAGTCA CGACACCGCA TCTATGA
 
Protein sequence
MISFKVELVL KKAAELLSRG KVASITEIVS ETGLPQEFVQ LVLESLEIPV VNGYIEESLP 
GVLVKAWLHG YDVVSLALSS GWSSFEELCC YLAESFGLRT KRNLRFKNLG RRFEVDLIAA 
SDNLVLVVDC KRWRRAPPSS LKKAAKAHLE RCLALADKMK SGADIGIRLG KQAKLYPLIV 
NLYDVGPLVE EGVLILGLKE FKEILQSLDP LLLEEMGAKS ITVTTPHL