| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0374 |
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| Symbol | |
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| ID | 4600774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 340007 |
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| End bp | 340846 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639773135 |
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| Product | zinc finger TFIIB-type domain-containing protein |
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| Protein accession | YP_919786 |
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| Protein GI | 119719291 |
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| COG category | [K] Transcription |
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| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCTGCC CTAACTGTGG GCGAAAAGTG AAACCCATAC TCAATTTCGA GACCGGCGAA
TACGCGTGCC CCTACTGCGG TTACGTCTTT CCCGAGAGCT TGCTCTTCAC GGGTCGGAGC
GCCCGCTCTA AGGAAGAATT CGCGAGAAAA GTCCACGACT ACCCCGTCTC AAGGGGTATT
GATACGACGC CCCAAGAAAT ATCCGAGAAG TACAAGCGTG CATACTACGA GTCGCTGGGA
AAGGAGAGAA AGAGTGCTAG TTACCTTAGG GAGGTAGAGT CCATGGCTAA GTCTATGAAC
CTGCCTCCCC ACCTCATCGA GGAAGTTAAG GAGTACTTTA CAAAGGTGCA GAAAGAGGGC
TTGTTGCGCG GAAGAAACCG CAAGGCGGTG GCAGCTGCCA TAATCTACTA CGTCTGCTCT
AAGGAAAAGA ACGTAAGTGT ATCCCTTAAG GACCTCGAAG GTGTCGCGGG AGTCTCAGAG
AATGACGTTA AAAAGGCTTA CAGAGTGTTG CTGAAGAAAG GAGTATTTGA GCTTGGACAA
CCCCACGTAT CGAAGCCTAG CAAGTATGTC TACAAAATAG TAGGTTCACA CGAGTTACAA
GAAGTCAGGA GCAACATACA GCTAAAACTT CTGGCAGACT TCGCCGACTC CCTTGGAAAC
CTGCTCCAAG GCAAGAAGCC TCGCGGAATC GCAGCGGCGG CAGTATACAT TATCGCCAAT
CTTCTTGGAT ACAGGAAAAC CCAGTCGTTG ATAGCGAAAA TAGCTGGAGT TTCAACGCTG
ACCCTGAGGA GAGTAGTGAA GGAAATAGAC GAAAACCTCG ACATATACAT AGAGATCTAG
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| Protein sequence | MSCPNCGRKV KPILNFETGE YACPYCGYVF PESLLFTGRS ARSKEEFARK VHDYPVSRGI
DTTPQEISEK YKRAYYESLG KERKSASYLR EVESMAKSMN LPPHLIEEVK EYFTKVQKEG
LLRGRNRKAV AAAIIYYVCS KEKNVSVSLK DLEGVAGVSE NDVKKAYRVL LKKGVFELGQ
PHVSKPSKYV YKIVGSHELQ EVRSNIQLKL LADFADSLGN LLQGKKPRGI AAAAVYIIAN
LLGYRKTQSL IAKIAGVSTL TLRRVVKEID ENLDIYIEI
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