| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0358 |
|---|
| Symbol | |
|---|
| ID | 4600896 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 327900 |
|---|
| End bp | 328286 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639773119 |
|---|
| Product | 30S ribosomal protein S8e |
|---|
| Protein accession | YP_919770 |
|---|
| Protein GI | 119719275 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2007] Ribosomal protein S8E |
|---|
| TIGRFAM ID | [TIGR00307] ribosomal protein S8.e |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.793187 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATTT ACCACGGCAA TGACCTGAGG AAAATAACCG GCGGGATTAA GGGTAGACAT
GTAAAGACTA AGCGCAAATA CCTCTCTGGG CGCTACCCGA TACTCACCGT TCCCGGGCAG
GCAACAGAAG TTAAGGTCGT CAAAGCGCGA GGTAATACGT ACAAGTTAAA GGTGAAGGTT
GCCAGCGAGG TGAACGTTTA CATCCCAAAG GAGGGAAAGA CTGTGAGAGC GCAAATAATC
AAGGTGCTGG ACAACCCGTC TAACAAGGAC TTCGCAAGGA GAGGGATAAT CTCTAAAGGC
GCAATACTGC AAACGAGCGT TGGCAAGGTA AAAGTCACTT CTCGACCAGG CCAGGACGGC
GTGGTTAACG GCGTTCTCGT TGAGTAA
|
|---|
| Protein sequence | MGIYHGNDLR KITGGIKGRH VKTKRKYLSG RYPILTVPGQ ATEVKVVKAR GNTYKLKVKV
ASEVNVYIPK EGKTVRAQII KVLDNPSNKD FARRGIISKG AILQTSVGKV KVTSRPGQDG
VVNGVLVE
|
|---|
| |