Gene Tpen_0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0332 
Symbol 
ID4601699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand+ 
Start bp300993 
End bp301661 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content54% 
IMG OID639773092 
Producthypothetical protein 
Protein accessionYP_919744 
Protein GI119719249 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCCGC TACTGGCATG GCTGCTAAGC ATAGCTAGAG GCGTGGGGGG CTACCTGGGC 
ATATTCGTCA TATCCATCCT GGGAAACCTC ATCCCATTCA TACCCATACC GTACCTAGTA 
GCCGTTTACC TCTACGCCGC CTACGTGCCC GGCTCTAACC CGTTCCTCGT AGGCGTGGTG 
AGCGGTGTGG GAGCGGGCGT TGGAAAGCTC CTCGTTTACC TGTTCAGCCG GGGAGGGGCA 
CGCCTGTTCA TGAGCCAAGA GTCGAGAGAA AGGTTCGAGA AGATAGGGAA AATGCTCGGT 
AACTATGGAG CAATAGCGGT ATTCCTATTC GCTGTAACGC CATCGCCGGA CGATGCAATC 
ATAATACCGC TGGGAATGAT GGGGTACCAT CCCTTGAAGT TCTTCGCAGC CGTTACGGCA 
GGCAAGATAA TAATCAGCAT AGCCACGGCA TTCGCGGGGA AAGCGGTCTT CCAGCTAGCC 
GGGGAAAACT TCCTCGAAAG CCTAGCCACT TCAATAGCGC TCTTCGTCGT AGTGATGCTT 
TTAATCTACC TTCTAGACTG GGAGGCCATA CTGAGCGATC TTGGAAGCAA GGGGGCGAGA 
GGCTTTCTGG AAGACCTGCG CAGAGAAGGT TTCTCGAAAT ACATGAAGTA CCGCACGAGC 
GCGCGCTAA
 
Protein sequence
MHPLLAWLLS IARGVGGYLG IFVISILGNL IPFIPIPYLV AVYLYAAYVP GSNPFLVGVV 
SGVGAGVGKL LVYLFSRGGA RLFMSQESRE RFEKIGKMLG NYGAIAVFLF AVTPSPDDAI 
IIPLGMMGYH PLKFFAAVTA GKIIISIATA FAGKAVFQLA GENFLESLAT SIALFVVVML 
LIYLLDWEAI LSDLGSKGAR GFLEDLRREG FSKYMKYRTS AR