| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0292 |
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| Symbol | |
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| ID | 4601301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 260514 |
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| End bp | 260903 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639773050 |
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| Product | putative phage repressor |
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| Protein accession | YP_919705 |
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| Protein GI | 119719210 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02228] signal peptidase I, archaeal type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000355656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCTGAGG ATCGGAGGGA AATTGTATTG TATGCTTTGA CTATAGTGGG GTTGCTGGTC
TTCTTGTTAT CGCTTCGATT CGTGCTCTCA ACCCCCGTCC CCCTAGCCGT TGTTTCGAGC
TGGTCCATGG AGCCCGTGCT ACACGTTGGA GACGTCGTGG TAGTCGCCGG GGGGAACAGC
TACACACTCG GCGACATCGT GATATACGAG AGAGGAGGAG AGCTCATAGT TCACCGAATA
GTTTTATCGG TGAACGGCAA GTACGTAACT AAGGGAGACG CCAACCCCCA GGCTGACAAC
ATCGTGCTAG GTAAAGACGC GATATACGGA AAGGTTCAGA TCGTAATACC GTACATCGGA
GCATTAAAAC TAATATTCTA CAAAGGCTAG
|
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| Protein sequence | MAEDRREIVL YALTIVGLLV FLLSLRFVLS TPVPLAVVSS WSMEPVLHVG DVVVVAGGNS
YTLGDIVIYE RGGELIVHRI VLSVNGKYVT KGDANPQADN IVLGKDAIYG KVQIVIPYIG
ALKLIFYKG
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