| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0286 |
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| Symbol | |
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| ID | 4602096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 251931 |
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| End bp | 255323 |
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| Gene Length | 3393 bp |
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| Protein Length | 1130 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639773042 |
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| Product | DNA-directed RNA polymerase subunit B |
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| Protein accession | YP_919699 |
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| Protein GI | 119719204 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR03670] DNA-directed RNA polymerase subunit B |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCGC GCGCCGTGCA GGCAAAGCTA TCCAGGGAGG ATAGGTGGAG AGTGGTAAAA
GCATACGTAG ACGAGCTAGG CCTCGTCAGG CAACACTTAG ACTCCTTCAA CGCTTTTCTA
GAGCGTGGAC TCCAGGAGAT AGTGGACGAG GTCGGCGGTA TCAAGGTTGA GTCGCAGGGT
GTTGAGATAA AGTTTGGGAA AATAGAGGTT GGTCAGCCCA CGTTTAGGGA GGCTGACGGT
AGCGATCTCG CTTTGACACC TATGATAGCA AGGCTGAGAA ACATAACCTA CGCGGCACCG
CTCTACCTTA CAATGACGCT CTACGTCGAC GGGGAGGAGA GGCGGACGGA GTCCGTCTAC
ATAGGTAGTC TGCCCATAAT GGTGAAAAGC AAGAAGTGCG TTCTCTACGG TCTCAAGTCG
GAAGACGAGA TAGTTAAGTA CGGCGAGGAC CCGTACGACC CCGGAGGGTA CTTCATCGTT
AACGGCTCTG AGAGAGTAAT CGTGATGCAG GAGGATCTGT CGGTGAACAG GGTTCTCGTG
GACTACGGCG GCGCTAGCGG CTCCGTCACG CATACAGCAA AGGTTTTCAG CGTTGCCGCT
GGCCAAAGGT CGCCGCTTAC AGTCGAGAGA ACGAAGGATG GGATGATATA CGCCTCCTTC
CCGGCTTGCC CGTCGAAAAT ACCAGTAGTA GTGTTGATGC GCGCGCTGGG TCTAAAGACG
GACCAGGAGA TAGCCTACGC CATAGGCAAC GATCCGATAA TTCAGCAGGA GTTTCTGCCC
GTATTAATGG AGCAATCGAA GATCGCCGCT ACGCCCGAGG AGGCTCTCGA CTACATAGGC
TCCAGGGTGT CCCCGGGCCA GCCGAGAAAC GTGAGGATAG AGAGGGCGCA AGCCGTTCTA
GATGAAAACT TGTTGCCGCA CATAGGTAGA GGCCCCGCTG CTAGGATTTC TAAGGCTTTC
TTCGTGGGGC AGATGGTTTC CCGGTTGCTC GAACTCAAGC TCGGCATGCG CGGGCCCGAT
GATAAGGATC ACCTCGCGAA TAAGAGGATA CGGCAGGCCG GCGAGCTGAT AGCGCAGGTG
TTCAGGAGCG CGTTTAGACA GCTAGTAAAA GAGATGACTT ACTCCATCGA GAGGCACACT
TCCAAGACTC GGGATATCAA CCTGGTGAGT ATAGTCAGGC CGGACATAAT TACCGAGAGG
TTAAACCACG CACTCGCGAC TGGCAACTGG GTGGGCGGCA GGACGGGTGT GAGCCAGATT
CTGGACAGGA CGAACTACCT CTCGACAATC TCCCACTTGA GGAGGGTTGT CTCGCCGCTA
TCCAGGACTC AGCCGCACTT CGAGGCTAGG GAGCTTCACC CGACGCAGTG GGGCAGGCTT
TGCCCCGTAG AAAGCCCCGA GGGGCAGAAC TGCGGCTTGG TAAAGCACTT GGCGCTTCTG
GCTACTCTCT CGAACGGGAC GGACGAGAAG CAGGTGTACG ACCTGCTGGT AGGCAGGCTG
GGAGTAGTCC CCGTGGAGAA GACGGTGGGG AAGAATATCT CGGGGGCTAG GGTCTACCTC
AACGGGCGGC TCATAGGCTA CGTTGAGGAC GGCAAGGGTC TCGCGGAGAC TTTGAGGAAG
CTTCGAAGAG AGGGAAGAAT AAGTCACGAG GTCAACGTTG CCTTCTATTC TCATGAATAC
ACCGTCGGCG GGGTTAAGGG TAGGATAGAG GAGGTTTACG TCAACTGCGA CGCTGGGAGG
ATACGAAGAC CTCTGATAGT AGTCGAAAAC GGTGAACCGA GGCTTAAACA CGAACATGTA
GAGCTGTTGA GGAAAGGCGA GTGGACTTGG AGCGACCTCA TAGAGAACGG CATAGTCGAG
TACCTAGACG CAGAGGAAGA GGAGAACGCC TACATAGCTA CGGATGTGTC CGAGCTAACT
CCTCAGCACA CTCACCTCGA GATTGTCCCG GCGGCGATCC TAGGCATTAT CGCGATGACG
ATACCCTTTA TCGAGTACAA TCAGTCGCCG AGAAACTCGT ATCAGGCGGC GATGGCTAAG
CAGTCCCTGG GAATACCGCA CTACAACTTC AAGCTCCGCA TGGACCCCAG GATGCACGTG
ATGTACTACC CCCAGAAACC GCTCGTGAAG ACTCGCATCT TCGACCTGCT ACCCTTAGAC
AACCTGCCCT ACGGCACAAA CATGGTGGTA GCGGTTCTGA CAGGCGGAGG ATACAACATC
CAGGATGCGG TGGTCATCAA CAAGGCTGCG ATAGAAAGAG GCATGTCGAG GTCCGTCTTC
TTTAGAACAT ACGAAGCCGA GGAGAGGAGG TATCCCGGTG GGCTCGAGGA TAGGTTCGAA
AAGCCCTCCC TAGAAAAGGA CCTTCTAGAC GTTAAGCCTC CTCAGGCTTA CGAGGCTATA
GACCCCGTGG ACGGCATAGC CTACGTGGAG GCAGAGCTCT ACGGCGGTCA AGCTGTGGTG
AGTAGGACGA GCCCGCCGCG CTTCTACACG AGCACCCTGG AACCTAGGGT TATGACCAAG
AGAAAGGACA CCTCCCTACT CCTGCGACAC GGTGAAAAAG GGATAATTGA CCGCGTCTTC
ATAATGGAGA GCCCCGGAGG CATAAAGCTC GCCAAGGTAA GAGTGAGAGA TCTGCGCCCC
ACGGAGCTCG GGGATAAGTT CGCCTCGCGC CATGGGCAGA AAGGCGTCGT AGGGATGCTT
GTACCACAGG AAGATATGCC GTTCACGGAA GAGGGGATAA CCCCTGACCT AATAATCAAC
CCGCACGCTA TTCCTTCGAG GATGACCGTC GGACAGCTAC TCGAGGCGAT AACGGGGAAG
GCTGCCGCGC TCGCCGGTAG GAGGATCGAT GCTACGGCTT TTGAACCGCC GTCGTTAGAT
GAGATAAGAG AGATACTCAG GAGCTATGGC TTCAGGAGCG ACGGGAAAGA GGTTCTCTAC
GACGGGGTTA CCGGGGAGAA GTTGGAGGCC GAGATATTTA TCGGTGTCGT GTACTACGAG
AAGCTACACC ACCTCGTTGC CGACAAGATG CACGCGAGAG CCAGGGGTAG GGTACAGATA
CTAACGCGGC AACCCACGGA GGGTAGAGCG CGGGAAGGAG GTCTGAGGTT CGGCGAGATG
GAGAAGGACT GCCTAGTCGG GCACGGAGCC TCCATGCTCC TTAGAGAGCG TCTCCTCGAA
AGCTCAGACA AGACTACGAT ATGGGTTTGC GAGAACTGCG GCTATATGGG GTGGTTCGAC
GCGAGGAAGA ATACCCCCGT ATGCCCTGTC TGCGGCGATA AGGGAAGGCT TAGCCCCGTC
GAGGTATCCT ATGCGTTTAA GCTACTTTTG CAGGAGCTTA CGGGGCTAGG GCTCTCTGTG
CGACTGATCC TTAAAGACAA AATCCAGTCG TGA
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| Protein sequence | MSSRAVQAKL SREDRWRVVK AYVDELGLVR QHLDSFNAFL ERGLQEIVDE VGGIKVESQG
VEIKFGKIEV GQPTFREADG SDLALTPMIA RLRNITYAAP LYLTMTLYVD GEERRTESVY
IGSLPIMVKS KKCVLYGLKS EDEIVKYGED PYDPGGYFIV NGSERVIVMQ EDLSVNRVLV
DYGGASGSVT HTAKVFSVAA GQRSPLTVER TKDGMIYASF PACPSKIPVV VLMRALGLKT
DQEIAYAIGN DPIIQQEFLP VLMEQSKIAA TPEEALDYIG SRVSPGQPRN VRIERAQAVL
DENLLPHIGR GPAARISKAF FVGQMVSRLL ELKLGMRGPD DKDHLANKRI RQAGELIAQV
FRSAFRQLVK EMTYSIERHT SKTRDINLVS IVRPDIITER LNHALATGNW VGGRTGVSQI
LDRTNYLSTI SHLRRVVSPL SRTQPHFEAR ELHPTQWGRL CPVESPEGQN CGLVKHLALL
ATLSNGTDEK QVYDLLVGRL GVVPVEKTVG KNISGARVYL NGRLIGYVED GKGLAETLRK
LRREGRISHE VNVAFYSHEY TVGGVKGRIE EVYVNCDAGR IRRPLIVVEN GEPRLKHEHV
ELLRKGEWTW SDLIENGIVE YLDAEEEENA YIATDVSELT PQHTHLEIVP AAILGIIAMT
IPFIEYNQSP RNSYQAAMAK QSLGIPHYNF KLRMDPRMHV MYYPQKPLVK TRIFDLLPLD
NLPYGTNMVV AVLTGGGYNI QDAVVINKAA IERGMSRSVF FRTYEAEERR YPGGLEDRFE
KPSLEKDLLD VKPPQAYEAI DPVDGIAYVE AELYGGQAVV SRTSPPRFYT STLEPRVMTK
RKDTSLLLRH GEKGIIDRVF IMESPGGIKL AKVRVRDLRP TELGDKFASR HGQKGVVGML
VPQEDMPFTE EGITPDLIIN PHAIPSRMTV GQLLEAITGK AAALAGRRID ATAFEPPSLD
EIREILRSYG FRSDGKEVLY DGVTGEKLEA EIFIGVVYYE KLHHLVADKM HARARGRVQI
LTRQPTEGRA REGGLRFGEM EKDCLVGHGA SMLLRERLLE SSDKTTIWVC ENCGYMGWFD
ARKNTPVCPV CGDKGRLSPV EVSYAFKLLL QELTGLGLSV RLILKDKIQS
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