Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0229 |
Symbol | rpl4lp |
ID | 4601219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 205724 |
End bp | 206527 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639772983 |
Product | 50S ribosomal protein L4P |
Protein accession | YP_919642 |
Protein GI | 119719147 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | [TIGR03672] 50S ribosomal protein L4P |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCAGG AAGTAGCCGA GGTTTTAGAG GTTCCCGTCT ACGATTTAAA CGGGGCTGCT GTGGAGAGGA TAAAGCTCCC CAGCTTCTTC AAGTCTCCAG TAAGGCCCGA CCTGATCAGG CGCGTCTACA TAGCCCTATT CACGTCTAGG TTGCAACCAA AGGGGACAGA CCCCCTAGCC GGCCTCCGAA CAACGGCAGA GAGCTTGGGA GTAGGACACG GTATCGCTAG AGTTGCCCGA ATAAAGGGCG GGTTGAGGGC CGCCAGGGTT GTCCAGGCGG TTAAGGGGCG TAGGGCGCAT CCTCCGCGCG TAGAGAAAAT AATCCGAGAG GAGGTTAACA GGAAGGAGAA GCGTAAAGCC CTGCTCTCGG CGCTGGCGGC TGTGGCGTCT AGGGACTTCG TGCTGAAGAG GGGGCACGTG GTGCCGGATA TCCCGCTGCC GGTGGTCGTA GCTGACGACT TGGAGAGCAT AAGCAAGGCT AGGGATTTGA GGGCTTTCCT GGAAAAGCTT GGACTCTGGA AAGACGTCGA AAGAGCCCAG ACCAATACAC GTGTGCGCGC GGGTAAGGGG AAGATGCGTG GCAGGAGGTA CAAGAAGCCG AAAAGCCTGC TGATAGTAGT TGGGGAGGCG CGAGGCATCG AGCTCGCCGC CAGGAATATG CCCGGAGTCG ACGTGGTAAC GTATAAAGAG CTGTCTGTGC TTCACCTAGC GCCTGGCGGG AATCCTGGCA GGCTAACTGT CTTCACGAAG TCGGCGGTTA AGGGGCTTGA GGAAAGGCTC AAAGGAGAGG TGTTGCAGAA ATGA
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Protein sequence | MSQEVAEVLE VPVYDLNGAA VERIKLPSFF KSPVRPDLIR RVYIALFTSR LQPKGTDPLA GLRTTAESLG VGHGIARVAR IKGGLRAARV VQAVKGRRAH PPRVEKIIRE EVNRKEKRKA LLSALAAVAS RDFVLKRGHV VPDIPLPVVV ADDLESISKA RDLRAFLEKL GLWKDVERAQ TNTRVRAGKG KMRGRRYKKP KSLLIVVGEA RGIELAARNM PGVDVVTYKE LSVLHLAPGG NPGRLTVFTK SAVKGLEERL KGEVLQK
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