| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0210 |
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| Symbol | |
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| ID | 4602221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 188817 |
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| End bp | 190646 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639772964 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_919623 |
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| Protein GI | 119719128 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.044129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGAAAG TATCACCTGG GAAAATCGGA GCTGTAATCT TACAGGGAAG CAAGGTATCG
CTGAACTTTA CCGTGGAGAA CGATGAAGGC ACTCCCGTAA AGGGCACTCC TTTCTTCAAC
CTAAAGGCTC AGGGGAAGCA ACAGATATAC GTTGTGTTCG AGCAAGCGGT TATTCAGCCT
GGAGAAAAAG CAACGTTCAA CTTTGAAGTT AAATTCGACG TACCGGTTGG AGAGGCTGTC
GCGTACTTCT GCTTCGAGAC GGACAAGGCT GTATGTGAAG AGAGGCAGGT CTACATCGCG
GGGGAGGGTG AAGCCATCTA CGTAGCTTTC GTGTGGCATC ACCACCAGGC CCCCCAGTTT
TACCCCGACG GGAGCCTAAA GGACGAGTGG GCATTTATAC ACGTCGCTAA GGGCGACTTC
TACGCGTATT CGGGGGGACC CTACAAGGTA CACATGGAGA CGCACAAACG TATACCAGGC
TTTATCGATG TAGACCACTT CTCCCCGTCG CTCCTGGAGC AGTGGTTGCT TTTTCTATCG
GGTAAGCTAA GGTCCTCGAC AGCAACCAAG GAGGACGTAG AGGGGTTGCT GAGCTTTCTT
AGGGAGAAGA TCCGGGAAGG CATCGTGGAG CCCCTGGGAA GCGTCTACGC CCACACGGTT
CTCGGCCTCG TTCTGAAGAA GGCTAAGCAG AGGGGCCTCG ACGAGATAGC GAAGAAGTTG
ATCGAGTGGG AGCTCCGGGA GGGCTTGAAG ATTGTGGAGG AAGCCCTGGG CCGCCGGCCG
AGCGGGCTTT GGACACCCGA AATGTTCTGG CACATGGACC TCGTCGACCT CTACGGCTCG
CTCGGAGTAA GGTACACCGT CCTGTGCGAG CAACACTTTA CGCGCGCTGG TGGGGACAAG
GAGAACATTT ACGAGCCATA CGTCGTCGAG GACCCTATTT CCGGGAGATC CGTCGTCGTC
TTCTTCAGGG ACCTAAAGCT CAGCAACTGG ATTAGCTTCA AGGTTGACTT CAAGAATCCA
GAGGAAGCGG ACAACGAAGC TAGAAGGTTT GTTATAGAGC TGGCTAAGAG GAGGGAGGTC
GCGCCAGGCG GGATTGTAAC CATAGCTCTC GACGGCGAGA ACTGGATGAT CATGCCGGCG
TACAGGAAGT ACGCGCCGTA CTTCCTGGAA AAAGTGCTCG AGTACATCTT GGAGAGCCAG
GTAATAAGGC TCACGACTTT ATCGAAGTAC CTCGACCAGA ACCCGCCGAA ACGCGTCCTT
GACTACATAC CGTCGGGCTC CTGGGTAGAG CTCTCGGATA AGCAGTGGAC CGGGGGCGCA
AAGGACGAGC TCTGGAACGA GGCAATGGAA ACTTTAGTCT ACGTTGAATC AGCGTATAGA
TTACTGGAAC CGGAGGCTGA GCGCCTGCTC GCAGATCCCG ACTCACCACT CTACAGGCTG
TTCAAAGCCA TCGCTATAGC CATAGACAGC GACTTCTACT GGTACGGAGA GTTGGAAAGA
GAACGGGAGT TTATAAAGGA GTGGTTAGCA GAGGCGCGGA AGATAGCTGG AGAAATACTC
GGAAACCTTA AGGCAAGGGA AGTCGGGAGG ACGAACAACC ATGCTTTCAT CGAAATTGAA
AACAGAAATC TCTTCTCGGC GAAGGTGAGG ATAGTTTCAG AGGCTAAGAG CCGAGTCGAT
GAAACGAGTA TAATTATCCC AGCGTCCTCG AAGGTAACCC TTCCCGTCTA CGTCGGTGAC
TCAAATACCC TTGTGAGAGT GGTTTCCGGT AAAGTAACTC TTCAAGTTGT TGGCGGCGTT
GACGGTTCTC CGGCGCCCCT CTCTCTTTAG
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| Protein sequence | MVKVSPGKIG AVILQGSKVS LNFTVENDEG TPVKGTPFFN LKAQGKQQIY VVFEQAVIQP
GEKATFNFEV KFDVPVGEAV AYFCFETDKA VCEERQVYIA GEGEAIYVAF VWHHHQAPQF
YPDGSLKDEW AFIHVAKGDF YAYSGGPYKV HMETHKRIPG FIDVDHFSPS LLEQWLLFLS
GKLRSSTATK EDVEGLLSFL REKIREGIVE PLGSVYAHTV LGLVLKKAKQ RGLDEIAKKL
IEWELREGLK IVEEALGRRP SGLWTPEMFW HMDLVDLYGS LGVRYTVLCE QHFTRAGGDK
ENIYEPYVVE DPISGRSVVV FFRDLKLSNW ISFKVDFKNP EEADNEARRF VIELAKRREV
APGGIVTIAL DGENWMIMPA YRKYAPYFLE KVLEYILESQ VIRLTTLSKY LDQNPPKRVL
DYIPSGSWVE LSDKQWTGGA KDELWNEAME TLVYVESAYR LLEPEAERLL ADPDSPLYRL
FKAIAIAIDS DFYWYGELER EREFIKEWLA EARKIAGEIL GNLKAREVGR TNNHAFIEIE
NRNLFSAKVR IVSEAKSRVD ETSIIIPASS KVTLPVYVGD SNTLVRVVSG KVTLQVVGGV
DGSPAPLSL
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