| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0205 |
|---|
| Symbol | |
|---|
| ID | 4602216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 183990 |
|---|
| End bp | 185009 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639772959 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_919618 |
|---|
| Protein GI | 119719123 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.234288 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTACCCAA AGGTAAGCAT AGTCATAGTG AACTTTAAGG GAACAGAAGC ACTGAAAAAG
TGTCTGAGAA GCGTTTTCGA AACCGAGTAC CCCGACTACG AGGTCATAGT TGTAGACTCC
CTGACCGATA ACGTCGAGAA AGCTTTGAGG GACGAGTTCG GATCTAAGGA AAACTTGAAG
ATCATTCACT TCGACTCGAA CATCGGCGCC TCGGGATCCC ACAACGTAGG GGCGATGGCG
AGCGACCCTA ACAGTAAGTA CCTGGTGTTC CTCGACAACG ACGTTGAAGT AGAAAAGGAC
TGGTTGAAGA GGCTGGTCGA GACCGCCGAG GAGAGCCCGA GGATCGGATG CGTTCAGGCG
AAAGTGATCT CGAAGAGCAA TGAGGGTAGG ATGGATCACG CAGGGCTAGC GTTAGACTTG
ACGGCGACGT GGCTTTCTAC GTACGGGTTT AGAGAAGAGA TATTCCAGCG CCCGATAGAG
TTGTTCGTCG CCAGTTCGGC TGCGCTTTTA ACCCCACGCG AGCTCTACTT TAAGGTAGGC
GGGTTCGACA GCTCCTACTT CATATACGAC GACGACACGG ATTACACGTG GCGCGTTAGG
CTTCAGGGCT ACATCTCCCT CCTGGAGACA AGGGCTCGCG TATACCACGA GGACAAGATA
AGCTCGAGGC TACGCTTCGA CAAGCTGTAC TTCGGGTATC GGAACAGGCT TCAGAACATC
GTGAAAAACA TGGACGCGAA GAACATGGTC GTTAGCCTGC TGGTGACCCT CTACCTTGGA
TACCTGGTAA CGGTACTCCT AGCGCTTGCC GGCAGGATCA GGGAGACAGC CGCATACTTC
TTGTCGTCTA CGAGCGTCGT GTTCTCGCTA CCAAGGCTTA TGTGGAAGCG TAAGCTAGTC
TCGCTGAAGA GAAGGGTTCC CGACAGCTAC TTCGAGAAGA AAGGCTTCCT TAGGAAGGAC
CTTCTCGGGA CGATCTACAT GACGAGGGCA TTGCTTATTC GCTCGGTAAG GAAGAAGTAG
|
|---|
| Protein sequence | MYPKVSIVIV NFKGTEALKK CLRSVFETEY PDYEVIVVDS LTDNVEKALR DEFGSKENLK
IIHFDSNIGA SGSHNVGAMA SDPNSKYLVF LDNDVEVEKD WLKRLVETAE ESPRIGCVQA
KVISKSNEGR MDHAGLALDL TATWLSTYGF REEIFQRPIE LFVASSAALL TPRELYFKVG
GFDSSYFIYD DDTDYTWRVR LQGYISLLET RARVYHEDKI SSRLRFDKLY FGYRNRLQNI
VKNMDAKNMV VSLLVTLYLG YLVTVLLALA GRIRETAAYF LSSTSVVFSL PRLMWKRKLV
SLKRRVPDSY FEKKGFLRKD LLGTIYMTRA LLIRSVRKK
|
|---|
| |