Gene Tpen_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0197 
Symbol 
ID4600806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp175078 
End bp177744 
Gene Length2667 bp 
Protein Length888 aa 
Translation table11 
GC content57% 
IMG OID639772951 
ProductATPase, P-type (transporting), HAD superfamily, subfamily IC 
Protein accessionYP_919610 
Protein GI119719115 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0474] Cation transport ATPase 
TIGRFAM ID[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.846204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTCCT GGCATGCGAT GAAGGTAGAG GATGTGTTAA GAGAGCTTGG AACGTCGCTA 
CAAGGCCTTC CAGTAGAGGA AGCCAGGAGG AGGCTCCAAG TATATGGTCC CAACGTTATC
GAGGAGGAGA AGAAGGTTCA CCCGCTAGAG ATATTCCTAA GACAGTTTAA AAGCCCGCTA
ATCCTTCTCC TGATTTTTGC CTCGATACTG TCCTATGCTG TGGGAGAAGC CTTCGACTCT
ATAGTCATTC TCGCGCTCGT ACTCGCCAGC GCCGCTCTCG GCTTCTACCA GGAGTACAGG
GCGGAGAAAG CATTGGAAGC GATTAAGAAG ATGGTAGCCC CGCAGGCGAC GGTGCTCAGA
GGCGGCGAGA AGGTCGTCGT AAACGCATCG GAAGTGGTTC CGGGAGACGT ACTCCTCCTG
AGCGCCGGCG ACAGGGTAGT CGCGGACGCA AGGATAGTCG AATCGGTGAA CCTCAGGGTA
AACGAAGCCC CCTTGACCGG TGAATCCACG CCCGTAGAGA AAATGGTGGA CCCAATACCG
GAGGACACGC CCCTCCCGGA CAGAGCCAAC ATGGTCTACG CGGGGACAGT CGTCGTGTAC
GGCAGGGGGA AAGCTGTTGT CGTCGCCACC GGTAAGAACA CCGAGCTGGG AAAGATTAGC
GCTACGCTGG AGGCGGTAGA AGAGCGGGAG ACACCGCTCG AACGGGAGCT TTCCAGGCTG
AGCAGGTGGA TACTCGTATT CATGCTAGTC GTAGCCGTGG TCGTATCGCT GGTAGGCTTC
TTCGTCAAGA AGTACTCTCC CATAGACCTG CTCCTCTGGA TAGTGAGCCT CGCGGTGGCG
GCAGTCCCGG AAGCCCTGCC CGTCGTTGTA ACGAGCTCCC TGGCGCTAGG CGTCTACCGC
ATGGCGAAGA AGAATGCCAT AGTAAGGAGG CTACCCGCCG TGGAGACTCT CGGCTCCACT
ACGTACATCT GCTCGGACAA GACGGGGACG ATAACGAAGG GAGAAATGAC CGCCGTAAAG
GTCTGGATGA AGGATGCCAC AATCGAGGTT ACAGGTACCG GGTACGAGCC CACGGGCAAG
TTACTCGTCG GCTCTAAGGA AGTAGATCCA AACGGGTACG AGGGCCTGCG GCTACTCCTC
TTAGCCGCCT TCAACAATAA CGACTCGGAG GTACGCTACC AGGACGGTAG ATGGGTTACA
AGCGGTGACG GCACCGAGAT AGCCTTGAAG GTTCTCGCGC TGAAGGCTGG AGTCAACGCC
GAGCTACCCA GACTGGGAGA GGTCCCGTTC TCCTCTGAGA GGAAGAGGAT GAGCACGCTA
CACGAGCTTG GAGGGAGGAG AGTAGTATTC ACCAAGGGAG CACCCGAGGT AGTGGTACCC
CTCTGCAGGT ACATCTCGTC GATGGATGGG CGTGTCGAGG AGCTCTCCGA GGAGGCGAAG
AGGCTCGTAC TCGCCGTGAA CGACGAGCTG GCAGGGCAGG GGTTGCGGAA CATAGCGATC
GCCTACAGGT ACCTCGACGA CGGGCGTAGC ACAATAACGG AGAGCGACGA GAAAGACCTC
GTACTACTGG GAATAGTCTC CATGATCGAT CCTCCGAGGC CTGAAGTCAA GGACGCTCTG
GAGACGTGTA AAAAGGCGGG AATCCGGGTA GCAATGATAA CCGGAGACCA CAAGCTCACA
GCGGTGGCTG TAGCCAGAGA GCTGGGCATG CTAGGCGAGG ACGACATAGT CGTAACGGGC
AAGGAGCTTG ACTCCATGAG CGACGCGGAG CTCTACGAGA AGGTTGAGAA GATCAGGGTT
TATGCTAGAG TATCGCCGGA GCACAAGTTA AGGATCGTCG AAGCTCTCAA GAAGAGGGGC
CATGTCGTCG CCATGACGGG CGACGGGGTT AACGATGCGC CAGCCCTCAA GGCGGCAGAC
GTCGGGGTGG CAATGGGTCG TACGGGCACG GAGGTCGCCA AGGAGGCTTC GGACCTTGTG
CTCGCGGACG ACAACTTCGC GACGATAGTC GAGGCTGTGA AGCTCGGTAG AGAGATATTC
GAGAACATAA AGAAGTTCCT CGTGTACCTC CTATCTGCGA ACGTCACAGA GCTCATGCTA
CCACTAGTCT CCTCGGTTCT AGGCCTACCG CTACCCTTCA CGGCAACGCA GATCCTCTGG
GTCAACCTCG TAACAGACGG GCCGCCGGCG ATCGCGCTAA GCCTCGAGAA AGGCGAGAAA
GACTTGATAT ACAGGAACCC CAGGAAACCA GGAGAGCCTA TTTTCAGTAA GAAGGAGATT
CTCCTGTTCC TCGTCGCCGT CCCGCTTGTC TTCACAGTGC TCCTCACCTA CGCTTTCAGC
TCTTTGCTTA GCCTCGGAGA ACCCGAGGCA GAAGCCAGAA CGGCTATCTT CACCTCCCTC
GTTGTCGCCG AGCTGGCAAT GGCGTACGCG TGGCGCTCCC TCAGAAAACC CTCCCTTACG
CTAAGCCCCC TCGACAACAA GCCGCTAGTA GTCTCAATAA TCCTCTCGGT TACTCTGCAA
CTAGCGTTCT TCGCTTCGCC CTACGTTATG CACGTCCTCG AAATTCATCC CGTGACGATT
AACGATATCA TCTACGCTGC CTTAGTGACC GCGGCGATGT TCGTGTCGGT AGAGGCGTTC
AAGTACCTGC TCTCCAAGTG GAAGTAG
 
Protein sequence
MPSWHAMKVE DVLRELGTSL QGLPVEEARR RLQVYGPNVI EEEKKVHPLE IFLRQFKSPL 
ILLLIFASIL SYAVGEAFDS IVILALVLAS AALGFYQEYR AEKALEAIKK MVAPQATVLR
GGEKVVVNAS EVVPGDVLLL SAGDRVVADA RIVESVNLRV NEAPLTGEST PVEKMVDPIP
EDTPLPDRAN MVYAGTVVVY GRGKAVVVAT GKNTELGKIS ATLEAVEERE TPLERELSRL
SRWILVFMLV VAVVVSLVGF FVKKYSPIDL LLWIVSLAVA AVPEALPVVV TSSLALGVYR
MAKKNAIVRR LPAVETLGST TYICSDKTGT ITKGEMTAVK VWMKDATIEV TGTGYEPTGK
LLVGSKEVDP NGYEGLRLLL LAAFNNNDSE VRYQDGRWVT SGDGTEIALK VLALKAGVNA
ELPRLGEVPF SSERKRMSTL HELGGRRVVF TKGAPEVVVP LCRYISSMDG RVEELSEEAK
RLVLAVNDEL AGQGLRNIAI AYRYLDDGRS TITESDEKDL VLLGIVSMID PPRPEVKDAL
ETCKKAGIRV AMITGDHKLT AVAVARELGM LGEDDIVVTG KELDSMSDAE LYEKVEKIRV
YARVSPEHKL RIVEALKKRG HVVAMTGDGV NDAPALKAAD VGVAMGRTGT EVAKEASDLV
LADDNFATIV EAVKLGREIF ENIKKFLVYL LSANVTELML PLVSSVLGLP LPFTATQILW
VNLVTDGPPA IALSLEKGEK DLIYRNPRKP GEPIFSKKEI LLFLVAVPLV FTVLLTYAFS
SLLSLGEPEA EARTAIFTSL VVAELAMAYA WRSLRKPSLT LSPLDNKPLV VSIILSVTLQ
LAFFASPYVM HVLEIHPVTI NDIIYAALVT AAMFVSVEAF KYLLSKWK