Gene Tpen_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0189 
Symbol 
ID4600622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp165739 
End bp166281 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content57% 
IMG OID639772943 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_919602 
Protein GI119719107 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGCTG GAAGAAACCC GGTAGTTGAG GAGAAGGATC CCGCTATCGA GAAGCTAGTG 
TGCATATACC CTGAGCGATG CATCGGTTGT AGAGCCTGCG AGGTGGCCTG CGAGATAGAG
CACGGTGGCA AGTCCTTTAT CGACGTATAC CTAATAGAGG AGGCCAGGAT GTGCGTACCG
CTGAACTGCA GACACTGCGA GGAGGCTCCC TGCATGGCCG TCTGCCCGGT GAAGGCAATC
AAGAGGGACG CCGAAGGAGC TGTAATCGTA GACTCCCTTA GGTGCATTGG GTGTAGGCTC
TGCGTTCTCG CATGCCCATT CGGCATACCC ACGGTCGACA AGGAGCTGAA GATAATGGTG
AAGTGCGACA TGTGTGCCGA GCGGAGGGCA CGCGGATTGG AGCCTGCGTG CGTAGCGACA
TGCCCGGCCG ACGCACTCGT GTACGAAAGC GTAGAAGAGT ACCAGCGCGC GAAACGCGCC
GCCACAGCTT TGAAGATAGC TGGAAGCGGA AGGGAATCCG AGATTAAAGG AATAATTGTA
TAA
 
Protein sequence
MAAGRNPVVE EKDPAIEKLV CIYPERCIGC RACEVACEIE HGGKSFIDVY LIEEARMCVP 
LNCRHCEEAP CMAVCPVKAI KRDAEGAVIV DSLRCIGCRL CVLACPFGIP TVDKELKIMV
KCDMCAERRA RGLEPACVAT CPADALVYES VEEYQRAKRA ATALKIAGSG RESEIKGIIV