Gene Tpen_0185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0185 
Symbol 
ID4600798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp160447 
End bp161922 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content54% 
IMG OID639772939 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_919598 
Protein GI119719103 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGCAT ACCTCCTCGT ATTGTTTGCG GCTCCTCTCT GCGCTTCAGC GTTTACTGCT 
CTACTTAGAA ACGCCAGAGT AGGGGAGATT CTCACAGTGG TCTCGACGCT CCTCCTCTCC
GCGGTTTCAT GTCTACTCAT GGTTGAAACG TCGACGGGCA GAAAGTTCCT GCTCCTGGGC
GACGAGTTCA TTGTAGACTC GCTGACCTCG CTAATGCTGG TCGTTATCTC ATTCGTGTCA
CTAATGGTAT CGCTGTACTC GCCGAAATAC CTAGCCTACG AGGTTGAACG CGGAGTCGTT
GCACGCGAGA AAGTAGTCCT CTTCTACGTC CTGCTCAACG CCTTTATCTT CACAATGATT
CTAGTAGTGA CAACGAACAA TATCGCGATA ATGTGGGTTG CATTGGAGGC CACGACGATA
GCGACGGCAC ACCTTGTCGC TACTTACCGC ACGGCGGAGG CCATCGAGGC TTCGTGGAAG
TACATTATTC TGTGCTCGAC GGGTATAGCC TTCGGGCTTT ACGGTGTGGT CACACTCTAC
TACACAGCCT ACTTAGCCGG CATCCCTGCC CCGCTCCTCT GGACAAGCCT AGTCGACCAT
GCAAAGATGC TTGAAGCACA CTCGACTATG GTAAAAATAG CCTTTACGCT TGCGCTTGTA
GGCTTCGGCA CGAAAGCCGG GCTAGCTCCC TTCCATACTT GGCTCCCGGA TACCTACTCC
GAAGCCCCGC CGTACGTGTC AGCACTTCTG GCCAGCATAC TGGAGGGTTG CGCGATATAC
ACTCTGGTGA GGTTCTACAG TGTCTCAGTG CTGGCCGGGG TGGGAGCTTT TGCTCAAACT
GTACTGCTAG TAGTAGGTAT AGCCTCACTT TTCATCTCCT CGTTGCACAT GCTCGCTGTG
ACCGACGTTA ACAGGCTTTT CGCACTTTCG AGCGTAGAGC ACATGGGTAT CATTGCCTGC
GCACTGGGGT TTGGCGGCTA CTTGGGCGCT CTAGCCGCTG TTTTCCACGT AGTAAACCAT
GCGCTCGTGA AGTCTGCCCT CTTCCTTTCC TCGGGCCTCG TAACGCTGTC TTACGGCACG
CGGAAAATAG AGGGGATAAG AGGCATGATG AGGTCCTACC CTGCGCTCGG CGCCCTAGTG
CTAGCCGGCG CATACGCGAT CATAGGGGGT CCTCCCTTCG GAACATTCCA GTCGGAGCTC
CTGGCGATAA TGGCTGGAGT GAAGTCCGGG AATCCTTTCG CCCTGGTGCT CTTCCTCGCA
GCGATAGTGG TGGCTTTCGC CGCGCTGCTC GTTAGTTGCA CAAACATGGT CTTCGGGGAG
CCAGCATCGA GCACAGAGAA GTATCCACAC ATACTGAAAG CTCCTATAAC CATTCTGCTA
CTGCTCTCGT TGCTCCTGGG CGTATATATA CCCGAGCCTT TACGTTCATG CCTTGAGAAT
GCCGGTAGGA GTATTGTAGG GGGTGGTGTG CCATGA
 
Protein sequence
MEAYLLVLFA APLCASAFTA LLRNARVGEI LTVVSTLLLS AVSCLLMVET STGRKFLLLG 
DEFIVDSLTS LMLVVISFVS LMVSLYSPKY LAYEVERGVV AREKVVLFYV LLNAFIFTMI
LVVTTNNIAI MWVALEATTI ATAHLVATYR TAEAIEASWK YIILCSTGIA FGLYGVVTLY
YTAYLAGIPA PLLWTSLVDH AKMLEAHSTM VKIAFTLALV GFGTKAGLAP FHTWLPDTYS
EAPPYVSALL ASILEGCAIY TLVRFYSVSV LAGVGAFAQT VLLVVGIASL FISSLHMLAV
TDVNRLFALS SVEHMGIIAC ALGFGGYLGA LAAVFHVVNH ALVKSALFLS SGLVTLSYGT
RKIEGIRGMM RSYPALGALV LAGAYAIIGG PPFGTFQSEL LAIMAGVKSG NPFALVLFLA
AIVVAFAALL VSCTNMVFGE PASSTEKYPH ILKAPITILL LLSLLLGVYI PEPLRSCLEN
AGRSIVGGGV P