| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0182 |
|---|
| Symbol | |
|---|
| ID | 4600884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 156712 |
|---|
| End bp | 157296 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639772936 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
|---|
| Protein accession | YP_919595 |
|---|
| Protein GI | 119719100 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATAA GGCAGATCCT AAAAATAGCC CTAAGGGAAG GAGTAGCAAC GCTTGAGTAC
CCGTTTAAGC CGGAGGAGGC TCCCGAGGAC TTTCGAGGAA AGCCGGAGAT AGACCCGAGC
ATATGCATGG GTTGCGGAGC TTGTGCTAAC GTGTGCCCAC CGGACGCTAT AACCTGCGTG
GATGACCTTG AGAGAGGACT GAGAACTTGG AAGATATTCT ACGGAAGGTG TATCTTCTGC
GGGAGATGCG AAGAGGCATG CCCGCTTTCA GCGATAAGGC AGAGCAAGGA GTACGAACTT
GCCTCGAAGA CTCGCGAGGA CTTGGAGGTA GTCGTAGAGA CGCCATTGGC GAGGTGTAGC
ACGTGCGGAA AGTACTTCCC TGTGACAGAG AGGGAAGTTG CGCAGGCCGC TCAGATACTG
GCGGAAGCGA AGACTCTGCC TCGCTCGGTG CTAGAGCTCC TGGAGAACGG CGTGGAGTGC
CCCGAGTGTA AGCGTAGGAG AACCGTGCTA TCTATAGTGA AGTCCGCAAG ACCGGGTGTA
AAGCCTCTGA GTGTTACTGG GGAAGAGGGT GGGAGGCATG AGTAG
|
|---|
| Protein sequence | MGIRQILKIA LREGVATLEY PFKPEEAPED FRGKPEIDPS ICMGCGACAN VCPPDAITCV
DDLERGLRTW KIFYGRCIFC GRCEEACPLS AIRQSKEYEL ASKTREDLEV VVETPLARCS
TCGKYFPVTE REVAQAAQIL AEAKTLPRSV LELLENGVEC PECKRRRTVL SIVKSARPGV
KPLSVTGEEG GRHE
|
|---|
| |