| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0181 |
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| Symbol | |
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| ID | 4600883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 155982 |
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| End bp | 156719 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639772935 |
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| Product | NADH ubiquinone oxidoreductase, 20 kDa subunit |
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| Protein accession | YP_919594 |
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| Protein GI | 119719099 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3260] Ni,Fe-hydrogenase III small subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.419402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAGGT TGGCTAAGCA GAAGGCTTAC GACGCCCTGA AGAGGTCGGT CTACCTACTT
AGAGTCGACT CGGGCTCCTG CAACGGTTGC GACATAGAGG TGTTCGACGC CCTGACCCCC
TATTTTGACG TTGAAAGGCT CGGTGTAAAG CTCGTACTTT CACCTAGGAT GGCGGATGTC
ATACTGGTCA CAGGCCCTGT CACTAGGCAG TTCCTACCCG TGCTCAAAGC AACATACGAA
GCTGCGCCCA AGCCCTGTGT AGTTGTTGCG TGCGGGGCTT GCGCCTGCGG CGGCGGAATA
TGGTACGACA CCTACGGGAC TGCAGGCGGG GTCGACAAAG TGATTCCCGT CGACGTGTAT
ATTCCCGGTT GCCCGCCCAG GCCTCACGCA ATACTGCACG GGGTGGCTGT TGCCCTCGAT
ATCCTAGAGC AGAAGGTGAA GAGATCGGAA ACGAAGGCTG ATGCAGAGAG CTTTAAACCC
GCGCTTCCGA GCCTCGAGGG CGCCATTAAC AGCTGGGAGC TTTACAGGGC CTTGAAGCTA
GAGCTCTACA AGCACCTCGG GTACAGGATC GGCTACAGAG TTTTATGCGA CCTGTTAAGG
ATCTCTAAGG GGAGCAAGGA CCTAGACGAC TTCGCCGCAA AAGCCGAGAA AGCGGTCTCC
GAGAAGTACC ACGACGCCCG AATAACCGAG GCAGTTAGGC TCTCATGCCT AAAACTCAAA
GAGGTGGTAG GAAGGTGA
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| Protein sequence | MSRLAKQKAY DALKRSVYLL RVDSGSCNGC DIEVFDALTP YFDVERLGVK LVLSPRMADV
ILVTGPVTRQ FLPVLKATYE AAPKPCVVVA CGACACGGGI WYDTYGTAGG VDKVIPVDVY
IPGCPPRPHA ILHGVAVALD ILEQKVKRSE TKADAESFKP ALPSLEGAIN SWELYRALKL
ELYKHLGYRI GYRVLCDLLR ISKGSKDLDD FAAKAEKAVS EKYHDARITE AVRLSCLKLK
EVVGR
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