Gene Tpen_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0154 
Symbol 
ID4601263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp131313 
End bp131957 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content60% 
IMG OID639772908 
Producthypothetical protein 
Protein accessionYP_919567 
Protein GI119719072 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.61111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAGCG TTAATTTCCG AGGGGTGAGC ATAACCCGCC TCGGGCACGC CGCCTTCAGG 
ATTACGGATG GAAAAGTCGT TGTCTACATA GATCCCTTCC AGGTGCCAAG CTCCCCCCGG 
GACGCCGACA TAGTGGTATG CACGCACGAC CACTACGACC ACTGTAGCCC GGACGATATA 
AGGAAGGTAG CCAAGCAGAC CACCGTCGTT GTCGCCAGCG TGAACTGCGC CGCGAAGGTT 
AAGGGGCTGG GATACGAGTA CAAGCTCCTC AACCCCGGGG ACAGGGTCGC CGTGAAGGGA 
GTCGAGATAG AGGCTGTGCC GGCATACAAC GTAGGCAAGA GGTTCCACCC CAAGGACTAC 
AAGGGGATAG GGGTCCTCGT AAGGCTAGGA GACGTCGTAG TCTACCACGC GGGCGACACC 
GACTTTATAC CGGAGATGGC GTCGCTGAAG GGCAAGGTCA GCGTAGCCCT ACTCCCGGTT 
AGCGGGACCT ACGTCATGGA CGCCGACGAG GCTGTGAAAG CCGCGGAGAC AATATCCCCC 
GAGCTAGCCA TACCGATGCA CTACGGGGCT ATAGTGGGCT CCGAGAGCGA CGCCAGGAGG 
TTTGCCGAGA AGCTCCAAGG CAAAGTCAGG GTGGAGGTGG TATAG
 
Protein sequence
MGSVNFRGVS ITRLGHAAFR ITDGKVVVYI DPFQVPSSPR DADIVVCTHD HYDHCSPDDI 
RKVAKQTTVV VASVNCAAKV KGLGYEYKLL NPGDRVAVKG VEIEAVPAYN VGKRFHPKDY 
KGIGVLVRLG DVVVYHAGDT DFIPEMASLK GKVSVALLPV SGTYVMDADE AVKAAETISP 
ELAIPMHYGA IVGSESDARR FAEKLQGKVR VEVV