Gene Tpen_0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0152 
Symbol 
ID4600644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp129621 
End bp130232 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content59% 
IMG OID639772906 
Producthypothetical protein 
Protein accessionYP_919565 
Protein GI119719070 
COG category[L] Replication, recombination and repair 
COG ID[COG4998] Predicted endonuclease (RecB family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.45662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCGCG GGGTATGGGT GGAGGCATTG GCGCGCCTAA TCTTAGAGCT CGAAGGGTTC 
TCCGTAGAGC AAACCCGCCT GAGGCTTGAG AGGAACGGCG TAAGCCTAGC GGAGGTAGAC 
ATCCTCGCTA GGAAGAACGG CGAGGCGTAC GCCGTTGAGG TGAAGTCCGG GAGGGTCTCT 
GTTACAGACG TAAGGCAGGT ATACGCGAAC GCCGCGCTCC TCGGAGCCAA GCCGCTCCTC 
ATCGCGAGAG GCTTCTCCGA TGAAGCCGCA AAAGCTACGG CCGAAGAGCT GGGCGTAAAG 
GTGCTACTCA TACCCGACTA CGTCTACTTC GTCGACACAG AGGAGCTCCT ACGCCTAGTG 
GAGGAAGCAG TAGCGCTGAC GTTGGAAAAA CTGCTCTCTG TAAGCCCGGC GAACCTGTCC 
CCACCGGAGG TAGAAGTCGT GAAAGCAATC GCCTCTTCAA GCTCATTCGA GGAAGCTGCG 
AGGAGGCTCG GCGTGTCCAC GGATGCGCTC GGGAAAGCCG TAGAAGCGCT CAGAGAGAAG 
GGGGCAATAA CTCTCCACTC GCCCTTCAGG CTTCTACGGC TTCAGTGCAA GCTCCTCCTA 
CTCTCGCTAT AA
 
Protein sequence
MTRGVWVEAL ARLILELEGF SVEQTRLRLE RNGVSLAEVD ILARKNGEAY AVEVKSGRVS 
VTDVRQVYAN AALLGAKPLL IARGFSDEAA KATAEELGVK VLLIPDYVYF VDTEELLRLV 
EEAVALTLEK LLSVSPANLS PPEVEVVKAI ASSSSFEEAA RRLGVSTDAL GKAVEALREK 
GAITLHSPFR LLRLQCKLLL LSL