Gene Tpen_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0114 
Symbol 
ID4600646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp89300 
End bp90499 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content56% 
IMG OID639772868 
ProductFAD dependent oxidoreductase 
Protein accessionYP_919527 
Protein GI119719032 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00154267 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCCTTA TAGAGGGAAG GTACGAGGCA GTAGTGATAG GGCTAGGACC CGCCGGGGCG 
GCGGCTCTCA AGAGACTACA GGAACTGGGG ATCAAGGCTG TAGGTATCGA GAGGAAGAAG
GCTCCAGAAG AGCCGGCTGT CTGCGGAGAG TTCCTTCCAG AGCCCTCCGC GATAGAGTTC
ATCTCCAGGT TTCCCTCTGT GAGAAAAGCC TACGAGTACA TAGGGCTGGC TAGGCGTACG
AACGCTATAC GCAGAATCAT ACTCAGCTTT GCCGGCGGGA AGACTTACAA CCTCGAAATC
CCAGGATTCA CAGTGAGTAG AAAGGAGATG GTGAGCAAGC TGATCGAGGG GTCTGACTAC
GTAACGGGTA GCGACGTTGT TGGAATCAGG CGCGTCGGAG ACGCCTACCT GGTGAAGACG
AGGAGGGGTA AAGAGTTCTC GGCGAGCTAC GTGATAGCCG CGGATGGTTT TCCTTCAGCT
ACGAGGAGAC TTCTAGGACT CCCAGCAGGC CTGCAACCGG AGGACTACGC CGTGGGGGTC
AACCTGAAGA TGGAGACTCC GAGCATGCCC AGAGATACCA TCTTCATGTA CGCTTCCAGC
TTTACCCAAG GAGGTTACGC ATGGATAATA CCGGTTGGAG ACGGCTTATC GAACGTCGGC
ATAGGTCTGC GCTTCAACTA CGTGAAGAAA GGGGCTAACC CCTTAAAGGC TCTCACCAGC
TTCGTGGAGC TGGAAAGGCG GGGCTTCCTA GACTCCTCCA GGCAGCTCGA AGAGCCTCGC
TCTAGGATGA TCCCCGTAAG CGGCTTCTAC TCGGAGCCTT CGACGGGGAA AGTGCTTTTC
GCCGGTGACT CTTTGGGGGC GGTTAACCCC ATTAACGGGG GCGGGATATT CACAGCGATG
GCTCTAGGGA TTCTCGCGGC GGAGAGCGTC TGGCTGGGGA ACCCCGGGAT CTACGACGAG
AGGTCCTGGA GGGAGATAGG GCAGGTACTC TCGATAGGGC GTGCCTACCG CGTGCTGGTA
GACTTTCTCT ACGAACACTT CGACCACGTA GCAGTGCTAA CGGCTCTCTT CCCGAGGTTC
CTCTTAGAGA AGATACTGAA AGGGGAGAAA ACGCCTATTA AGGGGATTCT CGAGATTGGA
ATAGGAAGGA AAACCTCCTA TCGACCTCCA CGGGGTCAAG CTTCTCGTAA GCCTCCGTAG
 
Protein sequence
MGLIEGRYEA VVIGLGPAGA AALKRLQELG IKAVGIERKK APEEPAVCGE FLPEPSAIEF 
ISRFPSVRKA YEYIGLARRT NAIRRIILSF AGGKTYNLEI PGFTVSRKEM VSKLIEGSDY
VTGSDVVGIR RVGDAYLVKT RRGKEFSASY VIAADGFPSA TRRLLGLPAG LQPEDYAVGV
NLKMETPSMP RDTIFMYASS FTQGGYAWII PVGDGLSNVG IGLRFNYVKK GANPLKALTS
FVELERRGFL DSSRQLEEPR SRMIPVSGFY SEPSTGKVLF AGDSLGAVNP INGGGIFTAM
ALGILAAESV WLGNPGIYDE RSWREIGQVL SIGRAYRVLV DFLYEHFDHV AVLTALFPRF
LLEKILKGEK TPIKGILEIG IGRKTSYRPP RGQASRKPP