| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0106 |
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| Symbol | |
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| ID | 4600854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 81929 |
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| End bp | 82816 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639772860 |
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| Product | phage integrase family protein |
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| Protein accession | YP_919519 |
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| Protein GI | 119719024 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGTG TGAAAGCTCC CTTCGCTGAA AGGAGTAACG ACGAGTTAAT AGATCTCTAC
ATTTCTCACC TAGTAGCGAG GAACCGCTCG GAGAAAACGA TCAAGAGCTT TAAAAGCATC
CTCGAAGAAT TCGTTCGCTT CCTGGGGGAC AGGCACGTAT CGCAGGTAAC GGTGTACGAC
GTGGACTTCT TCCTCGCGCA TCTAAGGAGA AAAGGCTGGA AAAAGGACAG CATATACACC
GCGGCGGTCG CCGTGAAGCG CTTTCTGGAG TTCTTGGGGC TTGGAGGCAA CATTGCCGGC
TTCGAGCTGC CCAAGCGCGA AAAGAGGCTT CCAAGGTACC TCGAGGCGGA GGAAGTCTTC
AGAATGGTGA ACGCCGCGGA GAACCTGAGA GACAAGCTAA TAGTCCTGCT ACTCTTCACG
ACGGGTCTCC GCGTCAGCGA GCTCGTATCG CTAAGAGTCA GCGACGTAGA CCTCGAAAAG
AGGACGCTCC GCGTTAGAGG GAAGGGGTCC AAGGAGAGGC TAGTATACTT CCCGGACTAC
GTAGCCGACC TCTTGAGGAG CTATATGAAG GGCCTTAACT CTGAGTGGCT CTTTCCCTCG
GAGACAGCCG AGCACATCCA CTACACCACC GTTGAACGCG TGTTGAAGCG CCTAAAGGAG
AAGGCGGGGA TCGAGAAGAA AGTCACGCCT CACACTCTGA GGCACTCCTT CGCGACCCTA
AGCCTGGCGG CCGGCCTGGA TATTCGAGAG ATACAGGAGC TGCTGGGGCA CTCGAACTTG
AACACCACGC AGGTGTATGC GCACGTCTCG CGTGAAAGGC TGAAGAGGGA CTACGAAAGG
GTTTGGAGCT CCCTGCTAGA CCCGCGTAGC GCTAAGGAGC AGTCCTAG
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| Protein sequence | MSSVKAPFAE RSNDELIDLY ISHLVARNRS EKTIKSFKSI LEEFVRFLGD RHVSQVTVYD
VDFFLAHLRR KGWKKDSIYT AAVAVKRFLE FLGLGGNIAG FELPKREKRL PRYLEAEEVF
RMVNAAENLR DKLIVLLLFT TGLRVSELVS LRVSDVDLEK RTLRVRGKGS KERLVYFPDY
VADLLRSYMK GLNSEWLFPS ETAEHIHYTT VERVLKRLKE KAGIEKKVTP HTLRHSFATL
SLAAGLDIRE IQELLGHSNL NTTQVYAHVS RERLKRDYER VWSSLLDPRS AKEQS
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