Gene Tpen_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0098 
Symbol 
ID4602014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp77609 
End bp78292 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content55% 
IMG OID639772852 
Producthypothetical protein 
Protein accessionYP_919511 
Protein GI119719016 
COG category[H] Coenzyme transport and metabolism
[K] Transcription 
COG ID[COG1339] Transcriptional regulator of a riboflavin/FAD biosynthetic operon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAAG ACTACGAGGT ATTCCCGCTA CTACTCGAGA TGGCGAAGAG GGGGTGTCTC 
GTCGCTCCCC GAAGACTGAG CAGGATAGAA ATCCTGAAGA CTCTGGGGCT AACGCCGTGG 
AGGTTTAAGA AGCTCGTCGA AGCAGCAGAA GAAGAGGGCT ACATTGAGAG AAGGGTTCAC 
GGGAGGATGG TTTTCTACGT GGTTACCGAG AGAGGGCGCG CCCTGCTTAG AAGGGTGTAC 
GACGACCTAA AAAGGACTAT CGACTCCTCC ACCTTCCTCA CGCTTAGAGG GTACGTCGTC 
CCAGGCTTGG GGGAAGGGGC GATCTACATG GGCATACCGA GGTACGTCGA GGCGTTTAAA 
GAGGTACTGG GCTACGAGCC TTACCCCGGC ACTCTCAACA TAAAGCTCGT AGACGAGGAC 
GTGTACTTGA GGAGAGCTCT CAGGGAGAAG AGGGTCGGCT TTAGGATTGA AGGTTTCAGG 
TTGGATGAAG GAAGAGAGTC CTGCGGGGTA ACCGTTTACA AGGCGATGAT CATGGCGAAC 
GGAGTAACCG TGAGCGGAGC CGCGCTGGAC ATAGATAAAA CGAAGCACGG AGACGAGATT 
CTCGAGCTGA TAGCCCCGGT AAGGTTGCGG GACGAGCTGC GCCTCAAGGA CGGCGATAAG 
GTGGAGGTTG TAATCCCAGT TTAG
 
Protein sequence
MSKDYEVFPL LLEMAKRGCL VAPRRLSRIE ILKTLGLTPW RFKKLVEAAE EEGYIERRVH 
GRMVFYVVTE RGRALLRRVY DDLKRTIDSS TFLTLRGYVV PGLGEGAIYM GIPRYVEAFK 
EVLGYEPYPG TLNIKLVDED VYLRRALREK RVGFRIEGFR LDEGRESCGV TVYKAMIMAN 
GVTVSGAALD IDKTKHGDEI LELIAPVRLR DELRLKDGDK VEVVIPV