Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0088 |
Symbol | |
ID | 4601655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 69803 |
End bp | 70297 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639772842 |
Product | hypothetical protein |
Protein accession | YP_919501 |
Protein GI | 119719006 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.362099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGTA TTCCTCAGCT CGTTGAAAAA ATTGCCGGTA TGGTTCCAGG GTTCAGGGGC TATAGCGGGG GTTCTCTCTC CGCCGATGAC CAGCTTATAA GAAAGAAAGT TTCGCTCATA CTTGACGAGG CAAGGTTACG CGTGGAGAGA CTCGAGTTTA ACGTTAAACG CAAGAACGTA TCTCTGGGCC TCAGGCTGGA CGATCTGCGT ATAGAGTTGA TGAAGGCTTC CCAGCTATTA AAGCAGCCCG GCGCGTCTTC CCCCGGTAAG GCTAGCATCG ACGATGAGTC TTTGCAACGG TTGCTAGAAG AGGATCTTAA GCTCATCTCC ACGGCTTCGA GGATCTTCGA GAGAGTTGTC GCCTTAACAC CAGCACTGGA GCCTAAAGAA TTCCTCGAAA AGGTAAACGA AGCCATATCC CTTGTCGTTG AAGCGGAGAA CGTTATAAGG GAGAGGGACA ACCTGCTGAA AAGGGTTCTA CTGGAGACAC CGTAG
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Protein sequence | MSSIPQLVEK IAGMVPGFRG YSGGSLSADD QLIRKKVSLI LDEARLRVER LEFNVKRKNV SLGLRLDDLR IELMKASQLL KQPGASSPGK ASIDDESLQR LLEEDLKLIS TASRIFERVV ALTPALEPKE FLEKVNEAIS LVVEAENVIR ERDNLLKRVL LETP
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