Gene Tpen_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0088 
Symbol 
ID4601655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp69803 
End bp70297 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content50% 
IMG OID639772842 
Producthypothetical protein 
Protein accessionYP_919501 
Protein GI119719006 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.362099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGTA TTCCTCAGCT CGTTGAAAAA ATTGCCGGTA TGGTTCCAGG GTTCAGGGGC 
TATAGCGGGG GTTCTCTCTC CGCCGATGAC CAGCTTATAA GAAAGAAAGT TTCGCTCATA
CTTGACGAGG CAAGGTTACG CGTGGAGAGA CTCGAGTTTA ACGTTAAACG CAAGAACGTA
TCTCTGGGCC TCAGGCTGGA CGATCTGCGT ATAGAGTTGA TGAAGGCTTC CCAGCTATTA
AAGCAGCCCG GCGCGTCTTC CCCCGGTAAG GCTAGCATCG ACGATGAGTC TTTGCAACGG
TTGCTAGAAG AGGATCTTAA GCTCATCTCC ACGGCTTCGA GGATCTTCGA GAGAGTTGTC
GCCTTAACAC CAGCACTGGA GCCTAAAGAA TTCCTCGAAA AGGTAAACGA AGCCATATCC
CTTGTCGTTG AAGCGGAGAA CGTTATAAGG GAGAGGGACA ACCTGCTGAA AAGGGTTCTA
CTGGAGACAC CGTAG
 
Protein sequence
MSSIPQLVEK IAGMVPGFRG YSGGSLSADD QLIRKKVSLI LDEARLRVER LEFNVKRKNV 
SLGLRLDDLR IELMKASQLL KQPGASSPGK ASIDDESLQR LLEEDLKLIS TASRIFERVV
ALTPALEPKE FLEKVNEAIS LVVEAENVIR ERDNLLKRVL LETP