| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0081 |
|---|
| Symbol | |
|---|
| ID | 4600811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 63192 |
|---|
| End bp | 64388 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639772835 |
|---|
| Product | aminotransferase, class I and II |
|---|
| Protein accession | YP_919494 |
|---|
| Protein GI | 119718999 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGCTGGG AAACAAGCTT TCGCCTAAGT AAAGCCGCCT CCCAGCTAGG AGCAGAGGAG
GCTTTTGTCT ACCTTGCGCG GAGCCTCGAG CTCAAAAGAA GAGGGGTCGA CGTCGTCTCC
TTCGGTATAG GGCAACCGGA CTTCCAGCCT CCGCCGCACG TGATATCTGA GGCTAAGAAG
GCGATGGACG AGGGGTTCAA CGGCTACGGT CCAAGCCTGG GAATGCCGGA GTTACGGGAA
GCTATAGCGA GCTTCGTGTC AGAGGAATAC GGAGTGGACG TGAAGGCGGA GGAGGTAGCC
GTTACTGTTG GAGCTAAATC AGCGATCTTT ATGGCCATGA TATCACTGTT GGAGCCCGGA
GACGAAGTAA TAATACCTGA CCCCTCTTAC CCCCTCTATG AGTCCGTCGC ACGCTTCGCC
GGTGCCAAGC CTGTCTTCCT GCGCCTCCAC AGGGGCAACG GCTACAAGGT GACCTTCGAA
GAGGTAGAGA AGCTCGTAAC TCCCAAGACT AGAATGATCG TTCTAAACTA CCCGGAGAAC
CCCGTGGGCA CCACCATGGA TCAAAGGGAC GTGGAAGAGC TTGTCGATTT CTCGGCTAAG
CGTGGCATAG TCGTACTGTC GGACGAGATA TACGACCACT TTGTCTACGA GAAAAAGCAC
TTTTCTACTT TGCAGACGTC GAGTTGGCGC GACGCCGTCT ACTACGTGAA CGGTTTTTCG
AAGACCTTTG GGATGACGGG CTGGAGGCTG GGCTACGTCA TCTCTAATAA AGAGCTGATC
TCCAAGCTAT CAGTGGTCGC CAACAATATC TACTCCTGCC CGGTAACCTT CGAGCAGATA
GCCGCTGCGA AGGCCCTGAA GGAAGGCTTG TCTTGGTTTA AACCCATACT CGAGGGGTAC
AGGAAGAGGA GGGACCTCAT ATACAGGGAG TTTCTCTCGA TAAAAGGCGT AAAAGTCGTA
AAGCCCGAGG GGGCTTTCTA CATATTCCCG GACTTTACTG AGGTGATACG GGAGAAAGGG
CTGAAGAATG AGCGCGAGCT TGCGGACAGG CTACTAGAGG AGAGAGGCGT AGTGGTTCTG
CCTGGGACAG CTTTCCCGAA GGAGGGTGGG AAGGGGCACC TAAGGTTCTC CTTTGCTGTG
AGTGAGAACG ACATTGTAAG GGGCATTGCG AGGATTAAGG AGTGGATAGA GTCCTGA
|
|---|
| Protein sequence | MGWETSFRLS KAASQLGAEE AFVYLARSLE LKRRGVDVVS FGIGQPDFQP PPHVISEAKK
AMDEGFNGYG PSLGMPELRE AIASFVSEEY GVDVKAEEVA VTVGAKSAIF MAMISLLEPG
DEVIIPDPSY PLYESVARFA GAKPVFLRLH RGNGYKVTFE EVEKLVTPKT RMIVLNYPEN
PVGTTMDQRD VEELVDFSAK RGIVVLSDEI YDHFVYEKKH FSTLQTSSWR DAVYYVNGFS
KTFGMTGWRL GYVISNKELI SKLSVVANNI YSCPVTFEQI AAAKALKEGL SWFKPILEGY
RKRRDLIYRE FLSIKGVKVV KPEGAFYIFP DFTEVIREKG LKNERELADR LLEERGVVVL
PGTAFPKEGG KGHLRFSFAV SENDIVRGIA RIKEWIES
|
|---|
| |