Gene Tpen_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0078 
Symbol 
ID4602016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp60972 
End bp61805 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content55% 
IMG OID639772832 
Producthypothetical protein 
Protein accessionYP_919491 
Protein GI119718996 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTACC CCGAGGTCTA CCACGACATA TCCATACTCC TATTACCCGA AGCCCTCTCC 
GAACTCAAAA AAGCTTCAGC GCCGCAACTG GAGGAGATCT CGCCCGTGGA AAAGTACCTA
CCGCAGTTGC TCACAGCGGC TACCGAGAGG CTGAAAAGCA GAGGCCTCGG GGTAGAGGAA
AAGGAGTTCC AGGAAGTTTT CAGGTACGGG ATAACGAGCA TCGCTAGGGC CTACGCCGAG
GGAGACTGGC GCTTCTACGC GTTTTTCTCG GAGCTATTCA CGAAGATCTC CATAATAGAC
AGCCTCTACG AGTGGAGCAT CAACATTGCA AGCCTCCCAC CGAGAGCAAC ATTCTTCGAG
GTAAACACTG TCGCGCCCGT CTACCTCTCA CGCCTATCCC AGCGTGTAAG CGGCAGTCCG
GGCATCATAA CCGAGAAGAG GTTCCTGTAC AACTCCACGT TTAAGGAGAT ATACGACGAG
TACTCCAGGA GGTACGACCT AAAGCTCAAC GTAGTGCCGC TTGAAGACGC GGATAGGCTA
GCCAGCCTAA ACGGTACAGT CGACGTCCTG GTCTTCGCAA CGCTCGACGC AATGAGCCTT
GGCTGGAGAA CCATTCTGGG CATGGCGTCC TCTCTCCTCA AGAAGGGAGG AACGCTCATA
GCCATAGTGC CTGATAACAA GAGGGAGGGT TTGCGTAGCC TCCTACGCGC CTGGCGCATA
CCGGACTACG AGCCCCCAGA AACCCTGGCA ACCAACCTGC AGGACTCGCG TTTCACCAAG
ATAAGGTACT CTACGAAGGG ACCTTTCTCA GCCTTCGTGG CGCAGAAAAG GTAG
 
Protein sequence
MSYPEVYHDI SILLLPEALS ELKKASAPQL EEISPVEKYL PQLLTAATER LKSRGLGVEE 
KEFQEVFRYG ITSIARAYAE GDWRFYAFFS ELFTKISIID SLYEWSINIA SLPPRATFFE
VNTVAPVYLS RLSQRVSGSP GIITEKRFLY NSTFKEIYDE YSRRYDLKLN VVPLEDADRL
ASLNGTVDVL VFATLDAMSL GWRTILGMAS SLLKKGGTLI AIVPDNKREG LRSLLRAWRI
PDYEPPETLA TNLQDSRFTK IRYSTKGPFS AFVAQKR