Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0064 |
Symbol | |
ID | 4600546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 48287 |
End bp | 48808 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639772818 |
Product | hypothetical protein |
Protein accession | YP_919477 |
Protein GI | 119718982 |
COG category | [S] Function unknown |
COG ID | [COG4720] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCCGGAA AAGGAAGAGC GAGCCTATTC ATAGCGCTTG CTTCTATACT CTCCGCCCTA ACCGCCGTCC TAACGTACTT TCCCGGCTTA GCCCTCCCGT CCCCAACCGG CGGCTACACG CACGTTGGAG ACACTATAAT CTACGTCTCC GCGCTACTCT TCGGGCCGTG GATGGGGCTC GTGGTAGGGC TCGTTGGCCC CGTGATCGCC GATTTCCTCG TAGGCTACCC GAGGTGGTAC GTGACGCTCG TAGCGCACGG GCTGCAGGGC TTCATAGCGG GTTACGGCGC CGGTAAGAAG TTCAAAACGC AGCTAGTGCT CATGGTAGCC GCCGGGCTTG TGATGTCGTT CACCTACTTC GTTGTGAACG TTTACGTCAA GGGGCTCGGG CCAGCGCTCG TATCGCTTGC CAGGGACATC TTCGGGCAAA CCCTCGTTTC GATAGTACTC GCGTCGCTAC TCCTTAAAGC CCTCGAGAAG GCTCCGGCGG TTAAGAGGGC CCAGGAGCTT CTCCGAAAGT AA
|
Protein sequence | MAGKGRASLF IALASILSAL TAVLTYFPGL ALPSPTGGYT HVGDTIIYVS ALLFGPWMGL VVGLVGPVIA DFLVGYPRWY VTLVAHGLQG FIAGYGAGKK FKTQLVLMVA AGLVMSFTYF VVNVYVKGLG PALVSLARDI FGQTLVSIVL ASLLLKALEK APAVKRAQEL LRK
|
| |