| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0052 |
|---|
| Symbol | |
|---|
| ID | 4600532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 39217 |
|---|
| End bp | 39618 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639772805 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_919465 |
|---|
| Protein GI | 119718970 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAGCA GGGTAGTAGT AGAGCTGAGG TTCAAGGGCT CCGGTGAACC TTTGACCTTC
GAGCTTGAGC CCGGCAGAAC GGTCGAGGTT GAGCTCGGGA ACCGCTCCCC GGAGACCCTG
GTCTACAGGT TCACCTTGAG GAGGATCGAG GGGTTCGTGT CCTACACGAT AGTTAAGCTG
GAGGCGGGCG GCAAGACGTC GTACGTGGGT CGCAGCACGA AGCCGGGGGT AACGCTCGAA
GTACTCGTAC ACCCCGGGGA GTCGGGGGCG CTCCGCCTAG GCGCGGTGTC CCCCAGGACC
TCCGAGGACG ACTTCAAGGT AGAGATAGAG GTTACAGTCG AGAGAGTCGC CGCGGCGACA
CTACCAGAAA AAGCACCGGT TTTAAGAGCT CAGCGCTTGT AG
|
|---|
| Protein sequence | MASRVVVELR FKGSGEPLTF ELEPGRTVEV ELGNRSPETL VYRFTLRRIE GFVSYTIVKL
EAGGKTSYVG RSTKPGVTLE VLVHPGESGA LRLGAVSPRT SEDDFKVEIE VTVERVAAAT
LPEKAPVLRA QRL
|
|---|
| |