| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0027 |
|---|
| Symbol | |
|---|
| ID | 4602077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 21018 |
|---|
| End bp | 22220 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639772780 |
|---|
| Product | alanine aminotransferase |
|---|
| Protein accession | YP_919440 |
|---|
| Protein GI | 119718945 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTAAAA CCAGACTGTC TGAGAGGATA GGTAGGCTGG ACTACCCTAT AAGGAAGTAC
AACGCTCTCG CAAGGTCCCT CGAGGAGAAG GGGGAGAAGG TAATATACTT GAACATCGGC
GACCCCTTGA AGTACGACTT CACTCCTCCG AGCGAGCTTG TCGAAGAAGC CTGCAGGGCC
CTCAGAGAAG GGCACCACTA CTACTCTCCG TCAGAGGGGC TCAAGGAGCT TCGCGAAGCC
ATAGCCTTCA AGGAGAAGTC CTGGAACGGC GTTCAAGTCG ACCCTAAGAA CGTGCTCGTG
ACGAACGGGG TCTCCGAGGG CATAAACGCG CTCTACGCCG CGCTCGTAAA CGAGGGTGAC
GAGGTGCTCA TACCTGACCC GAGCTACCCT CTTTACATAA ACTTCGCGGA CTTCTACAAC
GCCAAGAAGG TGTTTTACCG GACGCTGGAA GAGGAGGGCT GGAGGCCCGA CCCCGACGAT
ATCAGGAGGA AGATAACCGA TAAAACGAGG TTCATAGTGA TAAACAACCC GCACAACCCC
ACGGGAGCGG TCTACCCCGA GAAAACGGTG AAGGAGATAC TCGACATCGC GGCAGAGCAC
GGCTTACCGG TAGTCTCCGA CGAGATTTAC GACGCACTTG TGTTCGAGGG TTCCTTCAAG
AGCACAGCCG CCGTTGCCAG CGAGGACAAC GTAGTGATAG GCATGAACGG CTTCTCTAAA
ACATTCCTCG TAACCGGGTG GAGGCTCGGG TACATCTACC TGAGGGGGCC TGAAGAGAAA
ATCGCGGATC TGAGGGCCGC CCTCCTAGGA TTCCTGATGA CGAGGCTCAG CGCCGTTACC
CCACTTCAAG TCGCGCTGGC AAGGTTTGCC GTAAAGGCTC CGAAGCACCT CGAAGACCTC
AAGAGGAGGC TCGACGAGAG GAGGCGCTAC ACTGTTAGGA GGCTTAACGA GATACCGGGA
GTCAGCCTGG CCACTAGCCC CGCGGGAGCC TTCTACGCGT TCCCGCGGAT CGACGTCGAC
ATGGATGACG AGGAGTTCAC GAAGAGGCTC CTACTAGAAG AAAAAGTGTT CGTGGTCTAC
GGATCCGGCT TCGGCCCCCT AGGTGCCCGC CACGTTAGGC TGGTTTTCCT ACCCCCCGTA
CAGCAACTGG AGGAAGCCTT CGTCAGGATG GAGAGGTTCA TGAGGAGAGT TGCCGGGAGC
TAG
|
|---|
| Protein sequence | MSKTRLSERI GRLDYPIRKY NALARSLEEK GEKVIYLNIG DPLKYDFTPP SELVEEACRA
LREGHHYYSP SEGLKELREA IAFKEKSWNG VQVDPKNVLV TNGVSEGINA LYAALVNEGD
EVLIPDPSYP LYINFADFYN AKKVFYRTLE EEGWRPDPDD IRRKITDKTR FIVINNPHNP
TGAVYPEKTV KEILDIAAEH GLPVVSDEIY DALVFEGSFK STAAVASEDN VVIGMNGFSK
TFLVTGWRLG YIYLRGPEEK IADLRAALLG FLMTRLSAVT PLQVALARFA VKAPKHLEDL
KRRLDERRRY TVRRLNEIPG VSLATSPAGA FYAFPRIDVD MDDEEFTKRL LLEEKVFVVY
GSGFGPLGAR HVRLVFLPPV QQLEEAFVRM ERFMRRVAGS
|
|---|
| |